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25 Open 13 Closed
25 Open 13 Closed
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Issues list

Writer: should have options to handle existing files beyond just failing,
#105 opened Dec 27, 2024 by jjjermiah
Explore compression for saving/loading correlation matrix files
#102 opened Dec 19, 2024 by strixy16
Fill out the testing suite
#99 opened Dec 18, 2024 by strixy16
4 tasks
READII 2.0
Make function to create nice list of image types from negative control regions and types
#95 opened Dec 18, 2024 by strixy16
Make drop labels function outside of loadFeatureFilesFromImageTypes
#93 opened Dec 17, 2024 by strixy16
@strixy16
fix: Rename argument mata-var in download help CLI
#88 opened Dec 13, 2024 by jjjermiah
1
refactor: decide between loadDICOMSITK and read_dicom_series
#82 opened Dec 11, 2024 by jjjermiah
Continuous flag resulting in odd dimensions in pytest bug Something isn't working
#78 opened Dec 9, 2024 by jjjermiah
1
1
Implement Lasso feature selection enhancement New feature or request
#100 opened Dec 5, 2024 by strixy16
@strixy16
docs: set up a mkdocs and put basic documentation in documentation Improvements or additions to documentation
#72 opened Dec 5, 2024 by strixy16 READII 2.0
style: switch from camelcase
#71 opened Dec 5, 2024 by jjjermiah
Update randomized_sampled to just be called sampled enhancement New feature or request
#62 opened Nov 18, 2024 by strixy16 READII 2.0
Separate the ROI and type for negative control input enhancement New feature or request
#61 opened Nov 18, 2024 by strixy16
1
Dataset Checklist for READII usage
#55 opened Nov 1, 2024 by strixy16 READII 2.0
Nothing wrong with getSegmentationType and hasnt caused any issues (i think) good first issue Good for newcomers
#54 opened Oct 31, 2024 by jjjermiah
1
Email TCIA about removing RADCURE phase 1
#52 opened Oct 31, 2024 by strixy16
@skim2257
IDC notebook B enhancement New feature or request
#50 opened Oct 31, 2024 by strixy16
1 of 6 tasks
@strixy16
IDC notebook A enhancement New feature or request
#49 opened Oct 31, 2024 by strixy16
5 tasks
@strixy16 @jjjermiah @Mogtaba-Alim
1
Update ROI inputs to be dictionary enhancement New feature or request
#48 opened Oct 31, 2024 by strixy16
5 tasks
READII 2.0
Validate-MIT generated Nifti if loading in Readii to use instead of dicoms
#45 opened Oct 23, 2024 by jjjermiah READII 2.0
Refactor Feature Extraction Workflow to Modularize Preprocessing, Extraction, and Output Management enhancement New feature or request
#43 opened Oct 22, 2024 by jjjermiah READII 2.0
@jjjermiah
Implement handling for default config file for data setup for modelling
#101 opened Oct 11, 2024 by strixy16
HNSCC data throwing index out of bounds error in getROIVoxel Label
#22 opened May 22, 2024 by strixy16
displayCTSegOverlay breaks if sliceIdx for original image is passed when crop is True
#20 opened May 16, 2024 by strixy16
benchmarking negative controls
#18 opened Mar 26, 2024 by strixy16
ProTip! Adding no:label will show everything without a label.