caRpools ALPHA Release 1.025

In this alpha release,
several bugs were fixed.
Please see the updated MIACCS.xlsx file, updated scripts and updated RMD files.

Installation:
Extract the file and install using Rstudio -> install Package -> install from .gz file
After installation pleasedo:

library(caRpools)
load.packages()

Open the RMD file and fill out the MIACCS.xlsx.

caRpools 1.0 ALPHA RELEASE

This is an alpha release with a new structure.

• new MIACCS file, please see the provided file.
• new R code -> faster.
• added edgeR and sgRSEA method
• new visualizations
• added FASTQ quality reports

please use the ISSUES tab or write me if you encounter problems.
NO DOCUMENTATION YET.

please install the alpha version via RSTUDIO -> install Packages -> select .tgz file and select the .tgz file included in the ZIP.

caRpools 0.83

0.83 (latest CRAN)

changed data annotation to use Ensembl server for biomaRt - please see the changes in the miaccs file for "database"
updated Manual and Rd file