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Update README.md
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fsalbeez committed Jan 10, 2025
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Expand Up @@ -158,6 +158,9 @@ Each plate of samples that you run in CARMEN must include the following 3 contro
3. Positive control must contain the phrase ``"CPC"``.
* The ``"Combined Positive Control"`` contains a combined assay of synthetic targets corresponding to all viral assays tested in your CARMEN run.
* A positive signal for the CPC per viral assay is integral to validating the viral assay in your CARMEN run.
4. Negative Viral Assay Control must contain the phrase ``no_crRNA``.
* The ``no_crRNA`` control does not contain any viral crRNA assay and each sample should test negative against this assay.
* A negative signal for the ``no_crRNA`` control is integral to validating the sample tested in your CARMEN run.

The assumption for the remainder of the CARMEN analysis is that any sample that does contain the phrases ``NTC``, ``NDC``, and ``CPC`` is considered a “patient or clinical sample”.

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