[docs] Update pytorch article figure and caption #2146
Workflow file for this run
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name: R cellxgene.census package checks | |
on: | |
pull_request: | |
paths-ignore: | |
- "api/python/**" | |
- "tools/cellxgene_census_builder/**" | |
push: | |
branches: [main] | |
env: | |
CELLXGENE_CENSUS_USERAGENT: "CZI-test" | |
jobs: | |
build: | |
strategy: | |
matrix: | |
tiledbsoma_version: [tiledbsoma_release, tiledbsoma_latest] | |
runs-on: ubuntu-latest | |
steps: | |
- uses: actions/checkout@v4 | |
- uses: r-lib/actions/setup-r@v2 | |
with: | |
extra-repositories: https://tiledb-inc.r-universe.dev | |
- uses: r-lib/actions/setup-r-dependencies@v2 | |
with: | |
working-directory: ./api/r/cellxgene.census | |
extra-packages: any::rcmdcheck, any::styler, any::roxygen2, any::remotes | |
cache: true | |
- name: install tiledbsoma | |
# install tiledbsoma either from r-universe (release) or git HEAD (latest), | |
# overwriting any version cached by setup-r-dependencies. | |
run: | | |
if [[ '${{ matrix.tiledbsoma_version }}' == 'tiledbsoma_latest' ]]; then | |
Rscript -e 'remotes::install_git("https://github.com/single-cell-data/TileDB-SOMA.git", subdir="apis/r")' | |
else | |
Rscript -e 'install.packages("tiledbsoma", repos = c("https://tiledb-inc.r-universe.dev", | |
"https://cloud.r-project.org"))' | |
fi | |
- name: styler | |
run: Rscript -e 'library("styler"); style_pkg("api/r/cellxgene.census", dry="fail")' | |
- name: check session info | |
run: Rscript -e 'sessionInfo()' | |
- uses: r-lib/actions/check-r-package@v2 | |
with: | |
working-directory: ./api/r/cellxgene.census | |
args: 'c("--no-manual", "--as-cran", "--no-build-vignettes")' | |
build_args: 'c("--no-manual", "--no-build-vignettes")' | |
error-on: '"error"' | |