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Pull requests: chanzuckerberg/cellxgene-census

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Pull requests list

[python] Stop including "do_not_delete" key in result of get_census_version_directory
#1215 opened Jun 28, 2024 by ivirshup Loading…
1
2
[docs] Add PyTorch loaders article release
#1214 opened Jun 28, 2024 by pablo-gar Loading…
6
[docs] Update census data release page with upcoming LTS information
#1210 opened Jun 25, 2024 by pablo-gar • Draft
2
GeneformerTokenizer updates
#1199 opened Jun 21, 2024 by mlin • Draft
1
[python] CensusSCVIDataModule + notebook
#1196 opened Jun 17, 2024 by ebezzi Loading…
16
[python] set user-agent
#1193 opened Jun 12, 2024 by ivirshup Loading…
3 tasks
6
[python] Support custom obs encoders
#1191 opened Jun 12, 2024 by ebezzi Loading…
36
Update min python version, allow python 3.12
#1189 opened Jun 6, 2024 by ivirshup • Draft
1
2
[python] Update docs for get_obs, get_var documentation Improvements or additions to documentation python api Related to the API
#1170 opened May 31, 2024 by ivirshup • Draft
1
1
[python] ExperimentDataPipe: configurable method (nd.array, scipy.coo, scipy.csr)
#1169 opened May 31, 2024 by ryan-williams • Draft
@ebezzi
Implement Census Builder Prototype
#1165 opened May 28, 2024 by prathapsridharan • Draft
1
Embeddings search experimental API
#1164 opened May 27, 2024 by mlin Loading…
12
Embrace the __future__ of typing python api Related to the API
#1155 opened May 21, 2024 by ivirshup • Draft
1
[ci] Allow R acceptance tests to run from a branch Stale
#1147 opened May 14, 2024 by ebezzi Loading…
2
[python] Balance distributed partition size more evenly
#1135 opened May 9, 2024 by atolopko-czi • Draft
@atolopko-czi
1
[python] Pass in the full context to open_experiment in pytorch loaders Stale
#1108 opened Apr 24, 2024 by ebezzi Loading…
3
[DO NOT MERGE] Test new GH runners
#1098 opened Apr 11, 2024 by ebezzi • Draft
1
Add support for custom encoders Stale
#1069 opened Mar 29, 2024 by ridvan-eksi Loading…
8
[feat] option to return csr tensors in datapipe Stale
#1062 opened Mar 21, 2024 by martinkim0 Loading…
1
@ebezzi
5
[docs] Add notebooks for scientific validation of precomputed memento implementation
#1056 opened Mar 15, 2024 by prathapsridharan • Draft
[WIP] mrVI training pipeline
#982 opened Feb 8, 2024 by ebezzi • Draft
2
[python] run Geneformer WDLs on HealthOmics managed service instead of AWS Batch
#961 opened Jan 31, 2024 by mlin • Draft
1
scib-metrics scripts
#945 opened Jan 22, 2024 by ebezzi • Draft
1
memento
#918 opened Jan 4, 2024 by atolopko-czi • Draft
@atolopko-czi
1
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