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[misc] scib-metrics scripts #945

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b5b2dd5
init scripts
ebezzi Jan 22, 2024
66f0761
add vars
ebezzi Jan 22, 2024
fa17de4
add pickle
ebezzi Jan 22, 2024
ef43141
Add requirements.txt
ebezzi Jan 22, 2024
6a08ec1
Add yaml file
ebezzi Jan 23, 2024
78d4029
typo
ebezzi Jan 23, 2024
5254ab8
changes
ebezzi Jan 23, 2024
9abf1ff
changes
ebezzi Jan 23, 2024
8e70861
add subsetting
ebezzi Jan 23, 2024
e50ce12
add missing embs
ebezzi Jan 23, 2024
ae6e97d
fix
ebezzi Jan 23, 2024
9d47c94
Add tiledbsoma support
ebezzi Jan 24, 2024
3387c4f
fix indexing
ebezzi Jan 24, 2024
29acd78
Add asarray
ebezzi Jan 24, 2024
0017573
Proper usage of soma_joinid
ebezzi Jan 24, 2024
b282b6f
Proper usage of soma_joinid, pass 2
ebezzi Jan 24, 2024
39b2e4f
try: ilisi_knn metric
ebezzi Feb 20, 2024
7050c12
fix matrix
ebezzi Feb 21, 2024
ebb91c6
metric fix
ebezzi Feb 21, 2024
0123593
Update to scib 0.5
ebezzi Jul 1, 2024
bfdac76
Merge branch 'main' into ebezzi/scib-metrics-scripts
ebezzi Jul 1, 2024
5dbde3e
Add classifier metrics
ebezzi Jul 1, 2024
5d9d305
All metrics
ebezzi Jul 1, 2024
386880a
fix missing key
ebezzi Jul 2, 2024
6798b0c
Change query
ebezzi Jul 2, 2024
88936dc
Fixes
ebezzi Jul 5, 2024
1e059ca
Add ignore directives
ebezzi Jul 9, 2024
9596794
[misc] update metrics script for 2024 LTS
pablo-gar Jul 9, 2024
ef0b96f
Entropy fix
ebezzi Jul 9, 2024
510392b
Merge branch 'ebezzi/scib-metrics-scripts' of github.com:chanzuckerbe…
ebezzi Jul 9, 2024
f44637b
Lint
ebezzi Jul 9, 2024
141eee8
add plotting scripts
pablo-gar Jul 10, 2024
9547add
update metrics plotting script
pablo-gar Jul 12, 2024
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