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23 Open 60 Closed
23 Open 60 Closed
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Issues list

Reports of error in freeze_support with Windows installer bug GUI Graphical user interface
#154 opened Jul 1, 2024 by RalfG
Target-decoy competition settings
#153 opened Jun 4, 2024 by MatteoLacki
pepXML or mzIdentML from Comet
#152 opened May 31, 2024 by jke000
DeepLCFeatureGenerator multiprocessing issue when number of processes is more than 1
#151 opened May 23, 2024 by vrkosk
MS2PIPFeatureGenerator and DeepLCFeatureGenerator, provide a progress callback
#150 opened May 23, 2024 by vrkosk
pyopenms DLL issue
#149 opened May 22, 2024 by AUldry
Parameters for rescoring peptidomics data
#148 opened May 6, 2024 by Dmorgen
error running rescore - tries to download something?
#147 opened May 5, 2024 by Dmorgen
MemoryError with input file containing multiple million PSMs (DIA data)
#146 opened Apr 23, 2024 by Pichler98
Scipy dependency issue in Windows Installer for v3.0.3
#145 opened Apr 9, 2024 by RalfG
2
Could not find matching spectra question
#140 opened Apr 5, 2024 by JesusCastano01
1
MSMS Parsing with MaxQuant question upstream Issue in upstream dependency
#136 opened Mar 23, 2024 by JesusCastano01
@RalfG
3
Add user control for whether models are downloaded automatically enhancement
#135 opened Mar 22, 2024 by vrkosk
2
Uncaught exception in DeepLCFeatureGenerator if not enough peptides for calibration set bug enhancement
#130 opened Mar 22, 2024 by vrkosk
2
When using Percolator with more than 128 threads, MS2Rescore returns empty pout files
#117 opened Jan 4, 2024 by tivdnbos
Update DeepLC integration to send PSMList object instead of peprec dataframe enhancement
#113 opened Nov 30, 2023 by RalfG
1
Support different levels of confidence estimates when using mokapot feature new feature
#112 opened Nov 28, 2023 by jonasscheid
2
Prepec modification error: Multiple modifications per site not supported in Peptide Record format. question
#108 opened Nov 16, 2023 by NicolasProvencher
1
6
Add lower-rank filtering option feature new feature
#105 opened Nov 7, 2023 by RalfG
Improve logging of modification mapping functionality enhancement
#104 opened Nov 1, 2023 by RalfG
Suggestions for Ion mobility MS data
#100 opened Oct 22, 2023 by frankligy
2
Config file for maxquant example in v3.0.0-dev4
#98 opened Oct 3, 2023 by veitveit
1
Allow rescoring of multiple hits per spectrum feature new feature
#83 opened Oct 26, 2022 by JB91451
1
ProTip! Exclude everything labeled bug with -label:bug.