Spider-Pipeline

This is the meme-mast pipeline runner for identifying conserved motifs and cassettes. (some more updates coming soon).

Paper

link coming soon

This repository uses conda to mange its environment as specified in environment.yml. Install the environment with

conda env create --file=environment.yml

Then use conda activate spider-motif and conda deactivate to activate or deactive the environment.

Name		Name	Last commit message	Last commit date
Latest commit History 7 Commits
KD_Tree.py		KD_Tree.py
README.md		README.md
Spider_Pipeline.txt		Spider_Pipeline.txt
environment.yml		environment.yml
spider_io_handler.py		spider_io_handler.py
spider_pipeline_runner.py		spider_pipeline_runner.py
spider_utils.py		spider_utils.py