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1. GVDB GVDB Public

   Giant Virus Database

   3

2. viralrecall viralrecall Public

   Detection of NCLDV signatures in 'omic data

   Python 34 14

3. ncldv_markersearch ncldv_markersearch Public

   A tool for identifying phylogenetic marker genes in Nucleocytoviricota (giant viruses) and generating concatenated alignments.

   Python 10 2

4. pangenomics pangenomics Public

   Scripts and utilities for pangenomic/phylogenomic analysis of prokaryotic genomes. Scripts for the analysis of genomic features such as C-ARSC, N-ARSC, and intergenic spacer lengths are also includ…

   Python 10 6

5. markerfinder markerfinder Public

   scripts for predicting phylogenetic marker genes

   Python 4 1

6. virtree virtree Public

   Script for generating a binary alignment file in pseudo-FASTA fomat. Protein sequences from genomes are used as input.

   Python 2