Skip to content

Commit

Permalink
Merge pull request #7 from abretaud/yeast
Browse files Browse the repository at this point in the history
Fix permission problem when loading yeast data
  • Loading branch information
abretaud committed Jan 27, 2018
2 parents 9423bb4 + 4fd892c commit d378da9
Showing 1 changed file with 2 additions and 1 deletion.
3 changes: 2 additions & 1 deletion Dockerfile
Original file line number Diff line number Diff line change
Expand Up @@ -54,7 +54,8 @@ RUN perl Makefile.PL GMOD_ROOT=/usr/share/gmod/ DEFAULTS=1 RECONFIGURE=1 && \
make install && \
wget --quiet $SCHEMA_URL -O /chado.sql.gz && gunzip /chado.sql.gz && \
wget --quiet http://downloads.yeastgenome.org/curation/chromosomal_feature/saccharomyces_cerevisiae.gff && \
sed -i s'/%20/ /g' saccharomyces_cerevisiae.gff
sed -i s'/%20/ /g' saccharomyces_cerevisiae.gff && \
chown -R postgres:postgres /chado/chado/

COPY load_schema.sh /docker-entrypoint-initdb.d/00-load_schema.sh
COPY load_yeast.sh /docker-entrypoint-initdb.d/01-load_yeast.sh
Expand Down

0 comments on commit d378da9

Please sign in to comment.