Preventing SARS-CoV-2 superspreading events with antiviral intranasal sprays

Figure-generating code for the XX article, "Preventing SARS-CoV-2 superspreading events with antiviral intranasal sprays" by Booth, G et al.

Reproducing figures

Each figure is produced by a series of Jupyter Notebooks:

• Figure 3a: The impact of time-to-intervention on the number of infections.
• Figure 3b: Intervention coverage vs efficacy on the percentage of infections averted
• Figure 3c: Percentage of infections averted as a function of treatment efficacy, varying passenger and crew coverage
• Figures 4a-c: SPHH contact network and weighted contact matrix
• Figures 4e-h: Treatment adherence vs dosing regimen, and its impact on the number of infections averted
• Figure 5: Reduction in individual risk following treatment administration.

Click here for the Diamond cruise ship transmission models.
Click here for the SPHH conference transmission model.