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Remove tonsil from azimuth until we can upgrade seurat #110

Remove tonsil from azimuth until we can upgrade seurat

Remove tonsil from azimuth until we can upgrade seurat #110

name: Build Containers
on:
push:
branches: ["main"]
env:
REGISTRY: ghcr.io
jobs:
build-and-push:
runs-on: ubuntu-latest
permissions:
contents: read
packages: write
strategy:
matrix:
container:
[
azimuth,
celltypist,
crosswalking,
extract-summary,
gene-expression,
popv,
]
steps:
- name: Checkout repository
uses: actions/checkout@v2
- name: Set up Docker Buildx
uses: docker/setup-buildx-action@v2
- name: Log in to the Container registry
uses: docker/login-action@v2
with:
registry: ${{ env.REGISTRY }}
username: ${{ github.actor }}
password: ${{ secrets.GITHUB_TOKEN }}
- name: Extract metadata (tags, labels) for Docker
id: meta
uses: docker/metadata-action@v4
with:
images: ${{ env.REGISTRY }}/${{ github.repository }}/${{ matrix.container }}
- name: Copy shared folders
run: |
echo containers/*/context | xargs -n 1 cp -rf src/
- name: Build and push Docker image
uses: docker/build-push-action@v4
with:
context: ./containers/${{ matrix.container }}
platforms: linux/amd64
push: true
tags: ${{ steps.meta.outputs.tags }}
labels: ${{ steps.meta.outputs.labels }}