Merge pull request #14 from hubmapconsortium/popv

handles non integer raw matrix for cellxgene data
hubmapconsortium · Nov 10, 2023 · 97807db · 97807db
2 parents 71d3367 + b6b26a2
commit 97807db
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/containers/popv/context/main.py b/containers/popv/context/main.py
@@ -65,7 +65,7 @@ def prepare_query(
 
         if options["query_layers_key"] == "raw":
             options["query_layers_key"] = None
-            data.X = data.raw.X
+            data.X = numpy.rint(data.raw.X)
 
         if options["query_layers_key"] == "X":
             options["query_layers_key"] = None