Added version strings

src/ingest_validation_tests/codex_common_errors_validator.py

@@ -45,6 +45,7 @@ class CodexCommonErrorsValidator(Validator):
 
     description = "Test for common problems found in CODEX"
     cost = 1.0
+    version = "1.0.0"
     required = "codex"
 
     def collect_errors(self, **kwargs) -> List[str]:

src/ingest_validation_tests/codex_json_validator.py

@@ -9,6 +9,7 @@
 class CodexJsonValidator(Validator):
     description = "Check CODEX JSON against schema"
     cost = 1.0
+    version = "1.0.0"
     required = "codex"
 
     def collect_errors(self, **kwargs) -> List[str]:

src/ingest_validation_tests/fastq_validator.py

@@ -8,6 +8,7 @@
 class FASTQValidator(Validator):
     description = "Check FASTQ files for basic syntax and consistency."
     cost = 15.0
+    version = "1.0.0"
 
     def collect_errors(self, **kwargs) -> List[str]:
         threads = kwargs.get("coreuse", None) or cpu_count() // 4 or 1

src/ingest_validation_tests/gz_validator.py

@@ -31,6 +31,7 @@ def __call__(self, filename):
 class GZValidator(Validator):
     description = "Recursively checking gzipped files for damage using multiprocessing pools"
     cost = 5.0
+    version = "1.0.0"
 
     def collect_errors(self, **kwargs) -> List[str]:
         data_output2 = []

src/ingest_validation_tests/ome_tiff_validator.py

@@ -20,6 +20,7 @@ def _check_ome_tiff_file(file: str):
 class OmeTiffValidator(Validator):
     description = "Recursively test all ome-tiff files for validity"
     cost = 1.0
+    version = "1.0.0"
 
     def collect_errors(self, **kwargs) -> List[str]:
         threads = kwargs.get("coreuse", None) or cpu_count() // 4 or 1

src/ingest_validation_tests/publication_validator.py

@@ -19,6 +19,7 @@ class PublicationValidator(Validator):
 
     description = "Test for common problems found in publications"
     cost = 1.0
+    version = "1.0.0"
     base_url_re = r"(\s*\{\{\s*base_url\s*\}\})/(.*)"
     url_re = r"[Uu][Rr][Ll]"
     required = "publication"

src/ingest_validation_tests/tiff_validator.py

@@ -35,6 +35,7 @@ def _check_tiff_file(path: str) -> Optional[str]:
 class TiffValidator(Validator):
     description = "Recursively test all tiff files that are not ome.tiffs for validity"
     cost = 1.0
+    version = "1.0.0"
 
     def collect_errors(self, **kwargs) -> List[str]:
         threads = kwargs.get("coreuse", None) or cpu_count() // 4 or 1