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Add generating 3D volumes and masks from segmentations #3

Merged
merged 1 commit into from
Dec 14, 2023
Merged

Add generating 3D volumes and masks from segmentations #3

merged 1 commit into from
Dec 14, 2023

Commits on Dec 14, 2023

  1. Add generating 3D volumes and masks from segmentations 

    Also generate a json with dicom metadata of the first dcm file
and a list of slices, with same order than the volume and SOPInstanceUID

When create_volumes and download_dicoms are ON, the grayscale
volume will be created in the downloaded dicoms folder.
The masks will be generated in the segmentations folder.

Improve README
    @phcerdan
    phcerdan committed Dec 14, 2023
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