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Releases: liyu95/DeepSimulator

DeepSimulator1.5 released.

16 Jun 18:17
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The following things have been updated:

  1. Add low-pass filter to the signal processing.
  2. Interface optimized: we provided a more easy-to-understand interface and parameter control.
  3. Incorporate the Nanopore features released in LC2019.
  4. Add the support for Guppy basecaller. Since this version, Guppy will be the default basecaller.
  5. Multiprocess control.
  6. Memory optimization. There won't be memory problem even simulating a large number of reads.
  7. Storage management optimization. There won't be storage problem even simulating a large number of reads.
  8. Add the interface to control the average length of the reads, which still satisfies the read length distribution.
  9. Add a case_study.sh file, which is more easy-to-understand and shows the three-step pipeline of our tool clearly.
  10. Add the option to output signal file in txt format and alignment files.
  11. Multiple bugs fixed.

The first release of DeepSimulator

01 Jun 10:43
1fe98b7
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Pre-release

The first release of DeepSimulator. After the full testing of DeepSimulator, we will release v1.0. The v2.0 is on the way, which is more convenient and slim.