Releases: malariagen/malariagen-data-python
Releases · malariagen/malariagen-data-python
v13.3.0
What's Changed
- Raise error if colab VM not in US by @alimanfoo in #632
- Avoid random error when performing tests by @jonbrenas in #634
- Add toolbar_options to grumbling gridplots by @leehart in #633
- Add sample_query_options by @leehart in #628
Full Changelog: v13.2.1...v13.3.0
v13.2.1
What's Changed
- Further work on scalability for large biallelic genotype data computations by @alimanfoo in #626
Full Changelog: v13.2.0...v13.2.1
v13.2.0
What's Changed
- Handle chunks parameter given as a size in memory; improve default chunks by @alimanfoo in #622
- Random error when performing tests by @jonbrenas in #619
- Fix center and zoom map parameters to allow int or float values by @leehart in #625
- Set auto_pan False for marker popup in plot_frequencies_map_markers() by @leehart in #624
- Improve performance when accessing biallelic SNP calls by @alimanfoo in #623
Full Changelog: v13.1.0...v13.2.0
v13.1.0
What's Changed
- Add parameters to the Anopheles pca function to allow better handling of outliers by @alimanfoo in #616
- Support fractions for max_missing_an and min_minor_ac parameters when accessing biallelic SNPs by @alimanfoo in #617
Full Changelog: v13.0.4...v13.1.0
v13.0.4
What's Changed
- Update switcher.json by @leehart in #602
- Pass through chunks when computing biallelic SNP calls by @alimanfoo in #613
- Handle dask distributed progress by @alimanfoo in #614
- More options for automatic sizing of chunks by @alimanfoo in #615
- Fix typos in docs by @leehart in #610
Full Changelog: v13.0.3...v13.0.4
v13.0.3
What's Changed
- Upgrade scikit-allel minimum version 1.3.13 to resolve issues with running large PCAs on a distributed cluster by @alimanfoo in #605
Full Changelog: v13.0.2...v13.0.3
v13.0.2
What's Changed
- Upgrade scikit-allel to resolve issues running large PCAs on a distributed cluster by @alimanfoo in #603
Full Changelog: v13.0.1...v13.0.2
v13.0.1
v13.0.0
Release Notes
Python 3.9 no longer supported
Please note that Python 3.9 is no longer supported from this release.
What's Changed
- Drop support for Python 3.9, add support for numpy 2.x by @alimanfoo in #590
- Update GCS bucket to use single-region as default by @ahernank in #593
Full Changelog: v12.0.1...v13.0.0