- For any questions, please contact Wei-Hung Weng (ckbjimmy {AT} mit {DOT} edu)
- Latest update: May 29, 2022
- Most content such as people, alumni, projects, seminars, blogs can be updated via the
.mdfiles in thedocsfolder except for thenewsin theindex.html. i.e. if you want to add news, please directly add them intoindex.html, and remove old ones if needed. - Please update via the files in this github repo
- Create your own
.bibfile in the folderbib, then add<bibtex src="bib/[YOUR_BIB_NAME].bib"></bibtex>in the<head>ofpublications.html. Just need to do this once. - The easiest way to get your full bib data is exporting them from Google Scholar. However, you may want to assure that Google Scholar includes the papers you want to display and then exclude those papers Google Scholar has errorneously included.
- For the bib entry, please add
pmid,pmc,urlif possible, because Google Scholar typically omits these. If you get a bib entry from Pubmed, it will includepmidandpmc. The code will parse these attributes and display them on the website. - If you wish, you may also add the
tagsattribute. The strings in thetagscan be searched as a filter. - Please do not include punctuations such as
:or=or+in the bibentry key. It will result in problems displaying the paper/bib because of some vagery in the javascript bibtex parser. - An example of the above attributes:
@article{weng2017medical,
title={Medical subdomain classification of clinical notes using a
machine learning-based natural language processing approach},
author={Weng, Wei-Hung and Wagholikar, Kavishwar B and
McCray, Alexa T and Szolovits, Peter and Chueh, Henry C},
journal={BMC medical informatics and decision making},
volume={17},
number={1},
pages={155},
year={2017},
publisher={BioMed Central},
pmid={29191207},
pmc={PMC5709846},
url={https://bmcmedinformdecismak.biomedcentral.com/articles/10.1186/s12911-017-0556-8},
tags={machine learning, NLP, classification, ontology}
}
- For the thesis entry (
MEDG-theses.bib), it would be better to include the following attributes as they will be used and displayed:
@phdthesis{Ghassemi2017hq,
Author = {Ghassemi, Marzyeh},
Title = {Representation Learning in Multi-dimensional Clinical
Timeseries for Risk and Event Prediction},
Type = {PhD Thesis},
Year = {2017},
Month = {Jun},
Supervisor = {Szolovits, Peter},
Reader = {Guttag, John and Celi, Leo Anthony G},
School = {MIT},
Department = {EECS},
Address = {Cambridge, MA},
Url = {https://dspace.mit.edu/handle/1721.1/112389}
}
- The files in
psz_splitdirectory were for splitting one bibtex into several thesis categories. However, it's not completed and hooked up to the public website. - The bibtex parser is inherited and modified from
https://github.com/pcooksey/bibtex-js.