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New term X-linked syndromic complex neurodevelopmental disorder#8371

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sabrinatoro merged 5 commits intomasterfrom
issue-8266
Feb 20, 2025
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New term X-linked syndromic complex neurodevelopmental disorder#8371
sabrinatoro merged 5 commits intomasterfrom
issue-8266

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@yshwetar
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Closes #8266

Comment thread src/ontology/mondo-edit.obo Outdated
id: MONDO:1040018
name: X-linked syndromic complex neurodevelopmental disorder
def: "A disorder that is transmitted via X-linked inheritance and involves more than one phenotype associated with the central nervous system, including but not limited to intellectual disability, autism, and seizures (epilepsy), and also a distinctive pattern of other features including dysmorphisms and/or congenital malformations." [https://clinicalgenome.org/affiliation/40006/, https://orcid.org/0000-0002-0587-4693, https://orcid.org/0000-0002-6647-5493, PMID:33244165]
is_a: MONDO:0800439 ! syndromic complex neurodevelopmental disorder
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source is missing for this SubClassOf

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There are a few changes to make in this PR (e.g. adding a source for the SubClassOf). However, before making these changes, @yshwetar could you please confirm that this new requested term is different from MONDO:0100148 ('X-linked complex neurodevelopmental disorder')?
I "think" it is as in this new requested term is the syndromic version of 'X-linked complex neurodevelopmental disorder'. But let's confirm first. Also, if I am correct, we would need to make some additional updates to this term.

@yshwetar, let me know if you need help with writing to the requester.

@sabrinatoro sabrinatoro assigned yshwetar and unassigned sabrinatoro Nov 13, 2024
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sabrinatoro commented Nov 14, 2024

Update: the requester has been contacted for more information about their request
@yshwetar I am making this PR a draft until we hear back from the requester.

@sabrinatoro sabrinatoro marked this pull request as draft November 14, 2024 17:22
@sabrinatoro sabrinatoro added the blocked Something needs to be done before work can proceed label Nov 14, 2024
@Jciesielka1
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Hi @yshwetar and @sabrinatoro - Could you please provide a status update? We have a curation ready to be published and waiting on this term.

Let me know if you have any other questions on this one!

Julia

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I had made a comment back on the previous ticket responding to your question. Here it is again if that is helpful!

Yes, the term I am requesting (‘X-linked syndromic complex neurodevelopmental disorder’) is different from the existing term ‘complex neurodevelopmental disorder’ (MONDO:0100148).

‘X-linked syndromic complex neurodevelopmental disorder’ is different from ‘syndromic complex neurodevelopmental disorder’ in the same way ‘syndromic intellectual disability’ is different from ‘intellectual disability’.

Note also that the term ‘syndromic complex neurodevelopmental disorder’ (MONDO:0800439 - A disorder that involves more than one phenotype associated with the central nervous system, including but not limited to intellectual disability, autism, and seizures (epilepsy), and also a distinctive pattern of other features including dysmorphisms and/or congenital malformations) already exists in Mondo. We are just asking to have the same term for X-linked.

Thanks!
Julia

- Added ORCIDs and ClinGen link
@sabrinatoro sabrinatoro assigned sabrinatoro and unassigned yshwetar Feb 17, 2025
@sabrinatoro sabrinatoro marked this pull request as ready for review February 17, 2025 23:49
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Approving

@sabrinatoro sabrinatoro added approved and removed blocked Something needs to be done before work can proceed curateathon2024 labels Feb 17, 2025
@sabrinatoro sabrinatoro merged commit 030b9e4 into master Feb 20, 2025
@sabrinatoro sabrinatoro deleted the issue-8266 branch February 20, 2025 14:43
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X-linked syndromic complex neurodevelopmental disorder

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