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add missing pt_id parameter
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yaseminbridges committed Nov 12, 2024
1 parent 79c718a commit efc8b53
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion src/phenotype2phenopacket/convert/convert.py
Original file line number Diff line number Diff line change
Expand Up @@ -39,7 +39,7 @@ def convert_to_phenopackets(
for omim_disease in grouped_omim_diseases:
phenopacket_file = PhenotypeAnnotationToPhenopacketConverter(
human_phenotype_ontology
).create_phenopacket(omim_disease, phenotype_annotation_data.version)
).create_phenopacket(omim_disease, phenotype_annotation_data.version, None)
write_phenopacket(
phenopacket_file.phenopacket, output_dir.joinpath(phenopacket_file.phenopacket_path)
)

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