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@mpievolbio-scicomp

Scientific Computing @ Max-Planck-Institute for Evolutionary Biology

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  1. cancer_sim cancer_sim Public

    CancerSim: A python3 package for stochastic cancer simulation in 2D.

    Python 7 4

  2. obat obat Public

    Forked from CFGrote/ometa

    Plugins for OMERO

    Python 3 3

  3. pcaExplorer pcaExplorer Public

    Forked from federicomarini/pcaExplorer

    pcaExplorer - Interactive exploration of Principal Components of Samples and Genes in RNA-seq data

    R 2

  4. lineage-tracking lineage-tracking Public

    Forked from icvijovic/lineage-tracking

    Python 1 1

  5. GenomeFeatureFormatOntology GenomeFeatureFormatOntology Public

    An ontology to represent genome feature annotations in gff3 format.

    1

  6. rarefan rarefan Public

    Scheme 1

Repositories

Showing 10 of 62 repositories
  • orderedPainting Public Forked from bioprojects/orderedPainting
    mpievolbio-scicomp/orderedPainting’s past year of commit activity
    C++ 0 GPL-2.0 5 1 0 Updated Dec 19, 2024
  • Multi-StyleGAN Public Forked from ChristophReich1996/Multi-StyleGAN

    Official and maintained implementation of the paper "Multi-StyleGAN: Towards Image-Based Simulation of Time-Lapse Live-Cell Microscopy" [MICCAI 2021].

    mpievolbio-scicomp/Multi-StyleGAN’s past year of commit activity
    Python 0 MIT 3 0 0 Updated Dec 1, 2024
  • 2024-11-18-MPIEvolBio Public

    Website repo for the Software Carpentries Workshop at Max Planck Institute for Evolutionary Biology, Nov. 18. - 22. 2024

    mpievolbio-scicomp/2024-11-18-MPIEvolBio’s past year of commit activity
    HTML 0 0 1 0 Updated Nov 15, 2024
  • reproapp Public

    Base infrastructure for apptainer development on binder

    mpievolbio-scicomp/reproapp’s past year of commit activity
    0 BSD-3-Clause 0 0 0 Updated Oct 14, 2024
  • CxGviz Public Forked from interactivereport/cellxgene_VIP

    Enables cellxgene to generate violin, stacked violin, stacked bar, heatmap, volcano, embedding, dot, track, density, 2D density, sankey and dual-gene plot in high-resolution SVG/PNG format. It also performs differential gene expression analysis and provides a Command Line Interface (CLI) for advanced users to perform analysis using python and R.

    mpievolbio-scicomp/CxGviz’s past year of commit activity
    HTML 1 MIT 48 2 0 Updated Jul 23, 2024
  • gahyparopt Public
    mpievolbio-scicomp/gahyparopt’s past year of commit activity
    Python 0 GPL-3.0 0 0 0 Updated Jun 26, 2024
  • Evolution-und-KI Public
    mpievolbio-scicomp/Evolution-und-KI’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Jun 26, 2024
  • PyTripalSerializer Public

    Serialize Tripal's JSON-LD API into RDF format

    mpievolbio-scicomp/PyTripalSerializer’s past year of commit activity
    Python 0 MIT 0 6 1 Updated Jun 5, 2024
  • python-template-package Public template

    This is a template project for a full fledged python package under the umbrella of MPI for Evolutionary Biology

    mpievolbio-scicomp/python-template-package’s past year of commit activity
    Python 0 BSD-3-Clause 0 1 0 Updated Mar 27, 2024
  • 2024-03-18-MPIEvolBio Public

    Workshop Website for Software Carpentries Workshop at MPI Evolutionary Biology

    mpievolbio-scicomp/2024-03-18-MPIEvolBio’s past year of commit activity
    HTML 0 1 0 0 Updated Mar 18, 2024
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