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Factor out preprocessing #2748

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Factor out preprocessing

Factor out preprocessing #2748

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22s
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22s
subworkflows/nf-core/fastq_qc_trim_filter_setstrandedness/tests/main.nf.test docker NF-latest-everything
1m 37s
subworkflows/nf-core/fastq_qc_trim_filter_setstrandedness/tests/main.nf.test docker NF-latest-everything
1m 37s
tests/skip_qc.nf.test docker NF-latest-everything
8m 37s
tests/skip_qc.nf.test docker NF-latest-everything
8m 37s
subworkflows/local/utils_nfcore_rnaseq_pipeline/tests/main.function.nf.test docker NF-latest-everything
4m 22s
subworkflows/local/utils_nfcore_rnaseq_pipeline/tests/main.function.nf.test docker NF-latest-everything
4m 22s
tests/skip_trimming.nf.test docker NF-latest-everything
11m 7s
tests/skip_trimming.nf.test docker NF-latest-everything
11m 7s
tests/star_rsem.nf.test docker NF-latest-everything
10m 59s
tests/star_rsem.nf.test docker NF-latest-everything
10m 59s
subworkflows/local/prepare_genome/tests/main.nf.test docker NF-latest-everything
6m 51s
subworkflows/local/prepare_genome/tests/main.nf.test docker NF-latest-everything
6m 51s
tests/salmon.nf.test docker NF-latest-everything
5m 2s
tests/salmon.nf.test docker NF-latest-everything
5m 2s
subworkflows/local/utils_nfcore_rnaseq_pipeline/tests/main.pipeline_initialistion.workflow.nf.test docker NF-latest-everything
40s
subworkflows/local/utils_nfcore_rnaseq_pipeline/tests/main.pipeline_initialistion.workflow.nf.test docker NF-latest-everything
40s
subworkflows/local/utils_nfcore_rnaseq_pipeline/tests/main.pipeline_completion.workflow.nf.test docker NF-latest-everything
42s
subworkflows/local/utils_nfcore_rnaseq_pipeline/tests/main.pipeline_completion.workflow.nf.test docker NF-latest-everything
42s
tests/remove_ribo_rna.nf.test docker NF-latest-everything
15m 23s
tests/remove_ribo_rna.nf.test docker NF-latest-everything
15m 23s
subworkflows/nf-core/fastq_qc_trim_filter_setstrandedness/tests/main.function.nf.test docker NF-latest-everything
47s
subworkflows/nf-core/fastq_qc_trim_filter_setstrandedness/tests/main.function.nf.test docker NF-latest-everything
47s
tests/featurecounts_group_type.nf.test docker NF-latest-everything
10m 45s
tests/featurecounts_group_type.nf.test docker NF-latest-everything
10m 45s
tests/hisat2.nf.test docker NF-latest-everything
8m 41s
tests/hisat2.nf.test docker NF-latest-everything
8m 41s
tests/min_mapped_reads.nf.test docker NF-latest-everything
10m 25s
tests/min_mapped_reads.nf.test docker NF-latest-everything
10m 25s
tests/kallisto.nf.test docker NF-latest-everything
5m 5s
tests/kallisto.nf.test docker NF-latest-everything
5m 5s
tests/default.nf.test docker NF-latest-everything
11m 20s
tests/default.nf.test docker NF-latest-everything
11m 20s
subworkflows/nf-core/fastq_qc_trim_filter_setstrandedness/tests/main.nf.test docker NF-23.04
1m 41s
subworkflows/nf-core/fastq_qc_trim_filter_setstrandedness/tests/main.nf.test docker NF-23.04
1m 41s
tests/skip_qc.nf.test docker NF-23.04
8m 21s
tests/skip_qc.nf.test docker NF-23.04
8m 21s
subworkflows/local/utils_nfcore_rnaseq_pipeline/tests/main.function.nf.test docker NF-23.04
4m 11s
subworkflows/local/utils_nfcore_rnaseq_pipeline/tests/main.function.nf.test docker NF-23.04
4m 11s
tests/skip_trimming.nf.test docker NF-23.04
10m 46s
tests/skip_trimming.nf.test docker NF-23.04
10m 46s
tests/star_rsem.nf.test docker NF-23.04
10m 26s
tests/star_rsem.nf.test docker NF-23.04
10m 26s
subworkflows/local/prepare_genome/tests/main.nf.test docker NF-23.04
7m 7s
subworkflows/local/prepare_genome/tests/main.nf.test docker NF-23.04
7m 7s
tests/salmon.nf.test docker NF-23.04
5m 9s
tests/salmon.nf.test docker NF-23.04
5m 9s
subworkflows/local/utils_nfcore_rnaseq_pipeline/tests/main.pipeline_initialistion.workflow.nf.test docker NF-23.04
33s
subworkflows/local/utils_nfcore_rnaseq_pipeline/tests/main.pipeline_initialistion.workflow.nf.test docker NF-23.04
33s
subworkflows/local/utils_nfcore_rnaseq_pipeline/tests/main.pipeline_completion.workflow.nf.test docker NF-23.04
39s
subworkflows/local/utils_nfcore_rnaseq_pipeline/tests/main.pipeline_completion.workflow.nf.test docker NF-23.04
39s
tests/remove_ribo_rna.nf.test docker NF-23.04
15m 34s
tests/remove_ribo_rna.nf.test docker NF-23.04
15m 34s
subworkflows/nf-core/fastq_qc_trim_filter_setstrandedness/tests/main.function.nf.test docker NF-23.04
47s
subworkflows/nf-core/fastq_qc_trim_filter_setstrandedness/tests/main.function.nf.test docker NF-23.04
47s
tests/featurecounts_group_type.nf.test docker NF-23.04
11m 1s
tests/featurecounts_group_type.nf.test docker NF-23.04
11m 1s
tests/hisat2.nf.test docker NF-23.04
8m 48s
tests/hisat2.nf.test docker NF-23.04
8m 48s
tests/min_mapped_reads.nf.test docker NF-23.04
10m 59s
tests/min_mapped_reads.nf.test docker NF-23.04
10m 59s
tests/kallisto.nf.test docker NF-23.04
5m 18s
tests/kallisto.nf.test docker NF-23.04
5m 18s
tests/default.nf.test docker NF-23.04
11m 16s
tests/default.nf.test docker NF-23.04
11m 16s
confirm-pass
1s
confirm-pass
1s
7h 30m 44s