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Develop #2417

Merged
merged 140 commits into from
Feb 6, 2025
Merged

Develop #2417

merged 140 commits into from
Feb 6, 2025

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farid-zare
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This pull request objective is to test the COBRA toolbox CI functionality.

This is not meant to be merged.

farid-zare and others added 30 commits November 7, 2024 18:26
Update testSampleCbModelRHMC.m
Added functions created for the MicroMap publication. Those functions build upon the metabolic cartography functions within the visualisation part of the COBRA Toolbox.
- Explain why we use N = S^T,
- Describe the zero RHS and equality constraints,
- Note the check ensuring P*N' == 0 for the left null space.
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codecov bot commented Feb 5, 2025

❌ 6 Tests Failed:

Tests completed Failed Passed Skipped
193 6 187 42
View the top 3 failed tests by shortest run time
COBRA Toolbox testLrsInterface.m
Stack Traces | 0.263s run time
Could not read lrs output file.
COBRA Toolbox testGenerateFieldDescriptionFile.m
Stack Traces | 0.307s run time
Invalid file identifier. Use fopen to generate a valid file identifier.
COBRA Toolbox testPrintConstraints.m
Stack Traces | 0.739s run time
Assertion failed.

To view more test analytics, go to the Test Analytics Dashboard
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Functions for MicroMap paper
Fix in DEMETER to ensure reaction names are read
BugFix automatic glpk solver MgPipe
@rmtfleming rmtfleming merged commit 4a45a07 into master Feb 6, 2025
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5 participants