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    190 repositories

    • ferlab-svclustering

      Public
      Nextflow
      •
      Apache License 2.0
      •0•0•0•1•Updated Oct 8, 2024Oct 8, 2024

    • unic-dag

      Public
      Python
      •
      Apache License 2.0
      •0•1•0•2•Updated Oct 8, 2024Oct 8, 2024

    • clin-pipelines-dags

      Public
      Airflow dags definition
      Python
      •
      Apache License 2.0
      •0•0•0•0•Updated Oct 8, 2024Oct 8, 2024

    • datalake-lib

      Public
      Library built on top of Apache Spark to speed-up data lakes development.
      Scala
      •
      Apache License 2.0
      •2•6•0•6•Updated Oct 7, 2024Oct 7, 2024

    • fhavro

      Public
      Fhir-Avro Converter
      Java
      •
      Apache License 2.0
      •2•9•1•0•Updated Oct 7, 2024Oct 7, 2024

    • cqdg-dags

      Public
      Airflow DAGs for the CQDG project
      Python
      •
      Apache License 2.0
      •0•0•0•1•Updated Oct 7, 2024Oct 7, 2024

    • ferload

      Public
      Scala
      •
      Apache License 2.0
      •0•0•0•0•Updated Oct 4, 2024Oct 4, 2024

    • Post-processing-Pipeline

      Public
      Variant analysis for genome and exome VGCFs
      Nextflow
      •
      Apache License 2.0
      •0•0•8•0•Updated Oct 3, 2024Oct 3, 2024

    • users-api

      Public
      API to manage users
      TypeScript
      •
      Apache License 2.0
      •5•0•0•6•Updated Oct 3, 2024Oct 3, 2024

    • cqdg-FHIR

      Public
      FHIR clinical data model and examples
      GLSL
      •
      Apache License 2.0
      •0•0•0•0•Updated Oct 2, 2024Oct 2, 2024

    • ferlab-ui

      Public
      Shared Components
      TypeScript
      •
      Apache License 2.0
      •8•2•1•2•Updated Oct 2, 2024Oct 2, 2024

    • etl-cqdg-portal

      Public
      Scala
      •
      Apache License 2.0
      •0•0•0•0•Updated Oct 1, 2024Oct 1, 2024

    • obo-parser

      Public
      Scala
      •
      Apache License 2.0
      •0•1•0•0•Updated Sep 30, 2024Sep 30, 2024

    • ferlab-next

      Public
      ferlab-next
      TypeScript
      •
      Apache License 2.0
      •0•0•0•0•Updated Sep 30, 2024Sep 30, 2024

    • ferlab-svclustering-parental-origin

      Public
      Nextflow pipeline for CNV clustering of families for CNV parental origin study
      Nextflow
      •
      Apache License 2.0
      •0•0•0•0•Updated Sep 27, 2024Sep 27, 2024

    • terraform-etcd-prometheus-configuration

      Public
      Terraform module to generate prometheus configuration and store it in an etcd key value
      Smarty
      •
      Apache License 2.0
      •0•0•0•1•Updated Sep 27, 2024Sep 27, 2024

    • ferload-client-cli

      Public
      Scala
      •
      Apache License 2.0
      •0•1•0•0•Updated Sep 25, 2024Sep 25, 2024

    • devops-scripts

      Public
      Miscellaneous Scripts related to DevOps operations
      Python
      •
      Apache License 2.0
      •0•0•0•0•Updated Sep 18, 2024Sep 18, 2024

    • git-autosync

      Public
      Docker Image that automatically sync filesystem with remote git repository
      JavaScript
      •
      Apache License 2.0
      •0•0•0•2•Updated Sep 18, 2024Sep 18, 2024

    • clin-portal-theme

      Public
      Theme for Clin and prescription Portal
      Less
      •
      Apache License 2.0
      •0•0•0•0•Updated Sep 13, 2024Sep 13, 2024

    • kvm-dev-orchestrations

      Public
      This repo is meant to help the operations team troubleshoot our kvm modules locally
      HCL
      •
      Apache License 2.0
      •0•1•0•0•Updated Sep 10, 2024Sep 10, 2024

    • terraform-libvirt-minio-server

      Public
      Terraform module to provision a distributed minio server on libvirt/kvm
      HCL
      •
      Apache License 2.0
      •0•0•0•0•Updated Sep 5, 2024Sep 5, 2024

    • terraform-cloudinit-templates

      Public
      Our reusable cloud-init templates across clouds, organized as terraform modules in a monorepo
      Smarty
      •
      Apache License 2.0
      •0•1•0•0•Updated Sep 5, 2024Sep 5, 2024

    • quality-control-pipeline

      Public
      Dockerfile
      •
      Apache License 2.0
      •0•0•0•1•Updated Aug 29, 2024Aug 29, 2024

    • terraform-null-kubernetes-installation

      Public
      Terraform module to install kubernetes on existing infrastructure using kubespray
      HCL
      •
      Apache License 2.0
      •0•0•0•1•Updated Aug 29, 2024Aug 29, 2024

    • openstack-zeppelin

      Public
      Terraform module to provision apache zeppelin in openstack
      HCL
      •
      Apache License 2.0
      •1•0•0•0•Updated Aug 27, 2024Aug 27, 2024

    • kubespray-image

      Public
      Docker Image for Kubespray
      Dockerfile
      •
      Apache License 2.0
      •0•0•0•0•Updated Aug 21, 2024Aug 21, 2024

    • ferlease-playground

      Public
      Playground Repo to Test Ferlease Client
      HCL
      •
      Apache License 2.0
      •1•0•0•0•Updated Aug 7, 2024Aug 7, 2024

    • ferlease

      Public
      Client to manage concurrent feature releases in a gitops way on a kubernetes fluxcd orchestration
      Go
      •
      Apache License 2.0
      •0•0•0•0•Updated Aug 7, 2024Aug 7, 2024

    • cqdg-denovo-nextflow

      Public
      Nextflow
      •
      Apache License 2.0
      •0•0•0•0•Updated Jul 31, 2024Jul 31, 2024