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    18 repositories

    • AI_ML_Sandbox_Module

      Public
      NIGMS Sandbox Module - Practical Data-Centric AI/ML for Biomedical Researchers
      Jupyter Notebook
      •10•1•0•0•Updated Aug 22, 2024Aug 22, 2024

    • biostore_docs

      Public
      Documentation for the Biomedical Data Storage Resource (BioStore) at the University of Delaware.
      HTML
      •
      MIT License
      •0•0•0•0•Updated Jul 3, 2024Jul 3, 2024

    • pyiPTMnet

      Public
      A simple and lightweight python client for iPTMnet database
      Python
      •
      MIT License
      •2•5•3•4•Updated Jun 27, 2024Jun 27, 2024

    • alphafold2_on_biomix

      Public
      Shell
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Nov 2, 2023Nov 2, 2023

    • jupyterlab_on_biomix

      Public
      This repository hosts information about running jupyterlab on biomix HPC cluster GPU nodes.
      Shell
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Nov 1, 2023Nov 1, 2023

    • TTV_Virome_Signatures

      Public
      Perl
      •
      MIT License
      •0•0•0•0•Updated Feb 23, 2023Feb 23, 2023

    • FAIR_Omics-Workshop

      Public
      Contains materials for the FAIR Data Practices for Omics Analysis workshop from the University of Delaware
      Other
      •2•3•0•0•Updated Jul 25, 2022Jul 25, 2022

    • al_ml_workshop

      Public
      Practical AI/ML for Computational Biology and Chemistry Workshop
      Jupyter Notebook
      •10•15•0•0•Updated Jun 20, 2022Jun 20, 2022

    • ikg_v2_public

      Public
      This repository holds the code for experiments and training scripts used in PredKinKG framework.
      C++
      •
      GNU General Public License v3.0
      •0•2•1•0•Updated Jun 9, 2022Jun 9, 2022

    • Python-Bash-Bootcamp

      Public
      Jupyter Notebook
      •
      Other
      •2•1•0•0•Updated Jun 7, 2022Jun 7, 2022

    • covid19kg_rdf

      Public
      This repository contains code used to generate RDF files for COVID-19 Knowledge Graph (https://research.bioinformatics.udel.edu/covid19kg).
      Perl
      •
      Other
      •0•1•0•0•Updated May 10, 2022May 10, 2022

    • iPTMnet-API

      Public
      RESTful API for iPTMnet: A resource for protein post-translational modification network discovery.
      Rust
      •
      MIT License
      •0•1•5•0•Updated Apr 22, 2022Apr 22, 2022

    • triple_walk

      Public
      Triple walk algorithm to learn embeddings of entities in a knowledge graph
      Cuda
      •
      MIT License
      •0•0•0•0•Updated Apr 14, 2022Apr 14, 2022

    • iPTMnetR

      Public
      A simple and lightweight R client for iPTMnet database
      R
      •
      Other
      •0•1•2•0•Updated Nov 13, 2021Nov 13, 2021

    • COVID19hackathon

      Public
      Jupyter Notebook
      •9•0•0•0•Updated May 8, 2020May 8, 2020

    • flutter_google_map_view

      Public
      A flutter plugin for Google Maps
      Dart
      •
      MIT License
      •189•0•0•0•Updated Feb 27, 2019Feb 27, 2019

    • iPTMnet-Frontend

      Public
      Frontend for iPTMnet: A resource for protein post-translational modification network discovery
      Elm
      •
      MIT License
      •0•1•0•0•Updated Dec 24, 2018Dec 24, 2018

    • iPTMnet-Data-Importer

      Public
      A command line utility to import data from csv files into POSTGRES database.
      Rust
      •0•1•0•0•Updated Oct 19, 2018Oct 19, 2018