GitHub - pepperell-lab/RGAPepPipe_MAY: Updated versions of condor scripts for RGAPepPipe

pepperell-lab / RGAPepPipe_MAY Public

forked from myoungblom/RGAPepPipe_MAY

Updated versions of condor scripts for RGAPepPipe

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Name		Name	Last commit message	Last commit date
Latest commit History 17 Commits
dagTemplate		dagTemplate
oldFiles		oldFiles
single		single
bamqc.sh		bamqc.sh
bamqc.submit		bamqc.submit
bwaMEM.submit		bwaMEM.submit
check2Outputs.sh		check2Outputs.sh
checkOutput_removeIntermediates.sh		checkOutput_removeIntermediates.sh
fastq_dump.sh		fastq_dump.sh
fastq_dump.submit		fastq_dump.submit
fastqc.submit		fastqc.submit
fastqc2.submit		fastqc2.submit
picard.sh		picard.sh
picard.submit		picard.submit
pilonVCFtoFasta.py		pilonVCFtoFasta.py
pilon_fasta.submit		pilon_fasta.submit
samtools_sort.submit		samtools_sort.submit
samtools_view.submit		samtools_view.submit
trimmomatic.sh		trimmomatic.sh
trimmomatic.submit		trimmomatic.submit
vcf_pilon.sh		vcf_pilon.sh
vcf_pilon.submit		vcf_pilon.submit