fix linting issues #3551
Workflow file for this run
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| name: Unittests | |
| on: push | |
| jobs: | |
| run-unittests: | |
| # Run on merge to main, where the commit name starts with "Bump version:" (for bump2version) | |
| # if: "startsWith(github.event.head_commit.message, 'Bump version:')" | |
| runs-on: ubuntu-latest | |
| env: | |
| DOCKER_BUILDKIT: 1 | |
| BUILDKIT_PROGRESS: plain | |
| CLOUDSDK_CORE_DISABLE_PROMPTS: 1 | |
| # used for generating API | |
| SM_DOCKER: samplemetadata:dev | |
| defaults: | |
| run: | |
| shell: bash -eo pipefail -l {0} | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: actions/setup-python@v5 | |
| with: | |
| python-version: "3.11" | |
| - uses: actions/setup-java@v4 | |
| with: | |
| distribution: "temurin" # See 'Supported distributions' for available options | |
| java-version: "17" | |
| - name: Setup build env | |
| run: | | |
| set -euxo pipefail | |
| pip install --no-deps -r requirements-dev.txt | |
| # openapi-generator | |
| wget https://repo1.maven.org/maven2/org/openapitools/openapi-generator-cli/5.3.0/openapi-generator-cli-5.3.0.jar -O openapi-generator-cli.jar | |
| # liquibase connector | |
| pushd db/ | |
| wget https://repo1.maven.org/maven2/org/mariadb/jdbc/mariadb-java-client/3.0.3/mariadb-java-client-3.0.3.jar | |
| popd | |
| # liquibase | |
| # Temporarily disable due to removed liquibase 4.22.0, re-enable when liquibase release again | |
| # VERSION=$(curl -Ls -o /dev/null -w %{url_effective} https://github.com/liquibase/liquibase/releases/latest | grep -o "v.*" | sed s/'>.*'//g | sed s/'v'//g | sed 's/"//g') | |
| VERSION=4.21.1 | |
| curl -L https://github.com/liquibase/liquibase/releases/download/v${VERSION}/liquibase-${VERSION}.zip --output liquibase-${VERSION}.zip | |
| unzip -o -d liquibase liquibase-${VERSION}.zip | |
| echo "$(pwd)/liquibase" >> $GITHUB_PATH | |
| - name: "build image" | |
| run: | | |
| docker build \ | |
| --build-arg SM_ENVIRONMENT=local \ | |
| --tag $SM_DOCKER \ | |
| -f deploy/api/Dockerfile \ | |
| . | |
| - name: "build deployable API" | |
| run: | | |
| export OPENAPI_COMMAND="java -jar openapi-generator-cli.jar" | |
| python regenerate_api.py | |
| pip install . | |
| - name: "Run unit tests" | |
| id: runtests | |
| run: | | |
| coverage run -m unittest discover -p 'test*.py' -s '.' | |
| rc=$? | |
| coverage xml | |
| echo "rc=$rc" >> $GITHUB_OUTPUT | |
| - name: "Upload coverage report" | |
| uses: codecov/codecov-action@v4 | |
| with: | |
| files: ./coverage.xml | |
| token: ${{ secrets.CODECOV_TOKEN }} | |
| - name: "build web front-end" | |
| run: | | |
| set -eo pipefail | |
| pushd web | |
| # installs package-lock, not what it thinks it should be | |
| npm ci | |
| npm run build | |
| # eventually run web front-end tests | |
| popd | |
| - name: Fail if tests are not passing | |
| if: ${{ steps.runtests.outputs.rc != 0 }} | |
| uses: actions/github-script@v6 | |
| with: | |
| script: | | |
| core.setFailed('Unit tests failed with rc = ${{ steps.runtests.outputs.rc }}') |