Resolve main conflicts (#556)

populationgenomics · Sep 25, 2023 · 8f50173 · 8f50173
1 parent 6d1f9f1
commit 8f50173
Show file tree

Hide file tree

Showing 5 changed files with 62 additions and 66 deletions.
diff --git a/scripts/find_sequence_files_to_delete.py b/scripts/find_sequence_files_to_delete.py
@@ -34,7 +34,7 @@
 projapi = ProjectApi()
 
 # TODO: fetch this from metamist
-CPG_SEQUENCING_GROUP_IDS_TO_SKIP = {}
+CPG_SEQUENCING_GROUP_IDS_TO_SKIP: set[str] = set()
 
 
 def get_bucket_name_from_path(path_input):

diff --git a/scripts/sync_seqr.py b/scripts/sync_seqr.py
@@ -55,7 +55,7 @@
     ),
 }
 
-SGS_TO_IGNORE = {}
+SGS_TO_IGNORE: set[str] = set()
 BASE, SEQR_AUDIENCE = ENVS[ENVIRONMENT]
 
 url_individuals_sync = '/api/project/sa/{projectGuid}/individuals/sync'