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Release#994

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milo-hyben merged 2 commits intomainfrom
dev
Nov 21, 2024
Merged

Release#994
milo-hyben merged 2 commits intomainfrom
dev

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@milo-hyben
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EddieLF and others added 2 commits November 21, 2024 12:14
* Update vcgs fastq filename regex pattern

* Add TWIST library type for some cases

* Lint
* Script to upsert MGRB participants

* Fixed linting.

* Bump pip packages.

* Bump fastapi package.

* Type hinting

* Adding ability to pull metadata files from main or test upload buckets

* Adding ability to pull metadata files from main or test upload buckets

* Linting

* Changing create_participant() so that it returns Participantupsert object that we then append to a list. This list is then handed to ParticipantApi().upsert_participants() function so that only one call is made

* Allowing more flexible approach to name of column in sample metadata file that contains sample external id

* Linting

* Renaming filename to remove project name

* Linting

* Bump yarl and aiohttp pip packages.

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Co-authored-by: Milo Hyben <milo.hyben@gmail.com>
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Don't forget to not squash like I forget every time 😂

@milo-hyben milo-hyben merged commit 37b3f1a into main Nov 21, 2024
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4 participants