Dev Hacks

Hacks for developing q2galaxy

This also serves as a todo list of things that shouldn't be needed once we are finished:

Setting up environment:

Create a conda prefix-based environment using the vendored conda. The prefix should look like this:

galaxy/database/dependencies/_conda/envs/[email protected]

Showing tools:

diff --git a/config/tool_conf.xml.sample b/config/tool_conf.xml.sample
index f77edc40d8..6f45d38d10 100644
--- a/config/tool_conf.xml.sample
+++ b/config/tool_conf.xml.sample
@@ -27,6 +27,9 @@
     <tool file="cloud/send.xml" />
     <tool file="genomespace/genomespace_exporter.xml" />
   </section>
+  <section id="qiime2" name="QIIME 2">
+    <tool_dir dir="qiime2"/>
+  </section>
   <section id="collection_operations" name="Collection Operations">
     <tool file="${model_tools_path}/unzip_collection.xml" />
     <tool file="${model_tools_path}/zip_collection.xml" />