doc: add javadoc

src/main/java/org/janelia/saalfeldlab/Copy.java

@@ -150,7 +150,7 @@
 import picocli.CommandLine.Option;
 
 /**
- *
+ * Application to copy/ re-block/ re-compress a group from one N5 container into another.
  *
  * @author Stephan Saalfeld <[email protected]>
  */

src/main/java/org/janelia/saalfeldlab/GenericLongTypeLUTConverter.java

@@ -129,6 +129,9 @@
  * Converts a {@link RealComposite} into an {@link UnsignedLongType}.
  *
  * @author Stephan Saalfeld <[email protected]>
+ *
+ * @param <I> input type
+ * @param <O> output type
  */
 public class GenericLongTypeLUTConverter<I extends GenericLongType<I>, O extends GenericLongType<O>> implements Converter<I, O> {
 

src/main/java/org/janelia/saalfeldlab/ThresholdRealCompositeConverter.java

@@ -128,6 +128,8 @@
  * Converts a {@link RealComposite} into an {@link UnsignedLongType}.
  *
  * @author Stephan Saalfeld <[email protected]>
+ *
+ * @param <T> input type
  */
 public class ThresholdRealCompositeConverter<T extends RealType<T>> implements Converter<RealComposite<T>, UnsignedLongType> {
 

src/main/java/org/janelia/saalfeldlab/ThresholdRealConverter.java

@@ -127,6 +127,8 @@
  * Converts a {@link RealType} above threshold into an {@link UnsignedLongType}.
  *
  * @author Stephan Saalfeld <[email protected]>
+ *
+ * @param <T> input type
  */
 public class ThresholdRealConverter<T extends RealType<T>> implements Converter<T, UnsignedLongType> {
 

src/main/java/org/janelia/saalfeldlab/Unique.java

@@ -139,7 +139,7 @@
 import picocli.CommandLine.Option;
 
 /**
- *
+ * Application to extract the unique sets of numbers present in an N5 dataset.
  *
  * @author Stephan Saalfeld <[email protected]>
  */
@@ -148,7 +148,7 @@ public class Unique implements Callable<Void> {
 	@Option(names = {"-i", "--container"}, required = true, description = "container path, e.g. -i $HOME/fib19.n5")
 	private String containerPath = null;
 
-	@Option(names = {"-d", "--datasets"}, required = true, description = "dataset, e.g. -d '/slab-26,slab-27'")
+	@Option(names = {"-d", "--dataset"}, required = true, description = "dataset, e.g. -d '/slab-26'")
 	private String dataset = null;
 
 	public static <T extends IntegerType<T>>long[] uniqueInteger(final IterableInterval<T> iterable) {

src/main/java/org/janelia/saalfeldlab/View.java

@@ -174,7 +174,7 @@
 import picocli.CommandLine.Option;
 
 /**
- *
+ * BigDataViewer based viewer application for N5 datasets.
  *
  * @author Stephan Saalfeld <[email protected]>
  */