Code

Feat/smooth action#500

Code

Merged

cmhulbert merged 125 commits intomastersaalfeldlab/paintera:masterfrom feat/smoothActionsaalfeldlab/paintera:feat/smoothActionCopy head branch name to clipboardOct 17, 2023

+3,541-2,976

Commits

Commits on Aug 15, 2023

• fix: IDService temporary id range

  cmhulbert

  committed
  b7812b8

• feat: don't use (and remove) random array access

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  fc0a691

• fix: return after repaint without interval

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  e56b071

• feat(wip): smooth action

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  bffcf2d

• feat: initial working implementation of smoothAction

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  0cbf8b5

• fix: don't duplicate highest res scale for new label sources

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  978e9b5

Commits on Aug 16, 2023

• perf: apply mask

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  1504adc

• feat: progress bar for smooth action, cancel after apply

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  2abc5db

Commits on Aug 17, 2023

• feat: add blocking, parallel applyMask

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  b53f920

• perf: cleanup, use FastGauss

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  c1a0693

Commits on Aug 19, 2023

• fix: mesh export working again

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  f7657fe

Commits on Aug 21, 2023

• fix: improve parallel mask apply

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  31c57c7

• refactor: prefer job over scope

  Show description for 7b78e53
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  7b78e53

• perf: improve label aggregation

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  48795e9

• fix: cleanup executor services when done

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  6920b70

• feat: add RAI converters

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Commits on Aug 22, 2023

• ci: don't even attempt to sign macOS pacakges for now

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• chore: cleanup

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  e4ab671

• fix: don't depend on /

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  215ff58

Commits on Aug 23, 2023

• fix: trailling whitespace is not always valid for dataset names

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  4301beb

• feat: improve mesh export to obj, include material

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  9bad502

• fix: canvas was ignored during smoothing

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  d6a75f6

• fix: load from old h5 source metadata format

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  41e927b

Commits on Aug 24, 2023

• fix: only explicitly exit process if necessary (midi was used)

  Show description for a264b67
  cmhulbert

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  a264b67

• feat: alert exception, but don't return error code

  Show description for e33bed0
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  e33bed0

• build: remove SNAPSHOT deps

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  9f13444

• feat: undo headless tests, they recently stopped working on CI (only there...)

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  8af2294

• fix(test): compile error

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  53e7262

• feat!: remove inflate

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  360083b

• feat: change mesh setting defaults

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  f3484d8

• feat: change screen scale defaults

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  98e7140

Commits on Aug 25, 2023

• refactor!: rename methods

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  7f5d988

• feat: ensure N5Readers are valid, and N5Writers are writable before caching

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  5981ef9

• feat: better handle unavailable containers

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  74e1fab

• feat: support source state removal by exception handling

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  c6a6f47

• feat: select all by default

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  a6f50a7

• fix: don't queue unnecessarily until paintable

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  b177fc3

• Merge pull request #502 from cmhulbert/feat/smoothAction

  Show description for b6eac3d
  cmhulbert

  authored
  b6eac3d

Commits on Aug 29, 2023

• feat: add 1.0 back to default scales

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  ca9dfc6

• feat: cache by default

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  9329876

• feat: streamline n5 container caching, and separate open vs. create writers where possible

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• feat: prompt for location if dataset not found

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Commits on Aug 31, 2023

• feat!: use readers only unless writers are necessary

  Show description for 4b692d2
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  4b692d2

• fix: test and opening on windows

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  bc0da63

Commits on Sep 1, 2023

• fix: don't use platform paths for groups

  Show description for 606731c
  cmhulbert

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  606731c

• Merge pull request #504 from cmhulbert/feat/smoothAction

  Show description for 84e364b
  cmhulbert

  authored
  84e364b

• chore: bump n5 dependencies

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  d5c6360

• chore: debug log for opening reader/writer

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  14575dc

• fix: mask RAI not being extended

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  901f1f7

• fix: handle interruption of connected components during SAM

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  39b7c0e

• feat!: return button type of commit dialog

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  fcb4f94

• feat: support skip commit prompt when closing project, without closing paintera

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  13e111a

Commits on Sep 11, 2023

• chore: cleanup unused

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  a76e384

• fix: don't change state text while updating UI text

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  b809081

• fix: properly set max

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  4e77781

• fix: don't animate backwards

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  a8dc2fa

• fix: don't paint if renderer is null

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  0d4b084

• perf: label-multiset performance updates and bug fix bump

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  ba64380

• fix: don't synchronize now that LabelMultisetType.copy() is thread safe

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  9c6fa0e

Commits on Sep 12, 2023

• perf: limit threads for rendering

  Show description for 25cec36
  cmhulbert

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  25cec36

• perf: store value of properties for quicker access

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  89a1adc

• refactor!: use TaskExecutor instead of numThreads and ExecutorService

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  ed2ca94

• perf: dont use default executor, and only run single threaded

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  7f3f45d

• fix: limit render threads

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  a2a6044

• Revert "fix: limit render threads"

  Show description for 130bca8
  cmhulbert

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  130bca8

Commits on Sep 13, 2023

• feat: name render threads

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  b9622c2

• refactor!: change double buffer logic

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  d44b790

• perf: clearMask and clearUntouchedTargetPixels multithread and use render executor

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  3d0f1a2

• fix: accidentally used numBuffers instead of screenScales

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  20f461b

Commits on Sep 18, 2023

• fix: copy and update map instead of modification, for thread safety

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  5674594

• fix: multithreading requires thread-safe argbCache access

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  c8798a4

• fix: multithreading requires thread-safe visitedBlocks access

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  1f54a5c

• perf: don't get all three if unnecessary

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  36dae7a

• fix: default size 0,0

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  de72936

• fix: don't trigger change when adding a listener

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  4cfa67a

• fix: don't trigger update on construction

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  6d78e7c

• perf: don't set to all Opaque in the overlay renderer

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  e60107d

• perf: get all fragments and compare, instead of lookup each time

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  faeb475

• perf: predicate against Long instead of type; can reuse result, instead of multiple get() calls

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  be3c637

• refator: don't use default service, always just use one thread

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• refactor: extract blocksForLabel to be used elsewhere

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  3886c9c

• refactor!: double buffer logic

  Show description for cbac7e6
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  cbac7e6

Commits on Sep 19, 2023

• doc: remove incorrect label merge key binding information

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  c793e47

• perf: limit max framerate for paint requests

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  6d1b2e1

• perf: set priority for refresh and work threads

  Show description for 03eb093
  cmhulbert

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  03eb093

• fix: mark appropriate threads as daemon

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  aa0dd71

• feat: background Black prior to any sources loaded

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• fix: overlay canvas size 0 before set

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Commits on Sep 20, 2023

• fix: floodfill not released when done

  Show description for da0c0e1
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  da0c0e1

Commits on Sep 21, 2023

• cleanup!: remove unused class

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  183e20c

• fix: flood fill in shape interpolation

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  c9558a7

Commits on Sep 22, 2023

• fix: for now, don't trigger refreshes often during floodfill.

  Show description for 087e50e
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  087e50e

• fix: fill2d tool triggers now working properly with midi controls

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  06d9316

• fix: compilation error

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  9549596

Commits on Sep 25, 2023

• fix: stay in fill2d after fill during SI; don't allow "select label" with background (for now)

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Commits on Sep 26, 2023

• fix: OK button disable bindng

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  2013ba2

Commits on Sep 27, 2023

• chore(dep): bump saalfx to snapshot

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  2a9e693

• feat: use AnimationTimer instead of listener for renderer

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  2471dec

• feat: expose JvmOverloads

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  cb7596b

• feat!: update floodfill for AnimationTimers, refresh intervals, task triggers

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  272cfbb

Commits on Sep 28, 2023

• feat(doc): re-enable mouse controls for merge/detach

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  84320a4

• build(dep): bump saalfx to 0.8.0

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  fcac86e

• feat: reduce the amount of dimming on disable viewer panels

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  44b3d8b

• feat: extract wrappedSource layer logic to ViewerMask

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• feat!: improvements to floodfill

  Show description for d57d605
  cmhulbert

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  d57d605

Commits on Sep 29, 2023

• perf!: paint thread requests on an animation timer

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Commits on Oct 5, 2023

• feat: sam service/model configuration

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  39d3bcb

• feat: logging config updates, use ProjectDirectories

  Show description for be0763c
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  be0763c

• feat!: use ProjectDirectories for cache dir. Configurable cache and temp dir

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  1783ccd

• build(dep): bump saalfx to snapshot

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  3d4858f

• chore: remove unused imports

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  1ce3bca

• feat: improve manually specifying active segments,fragments,last selection. UI improvements

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  3641635

Commits on Oct 6, 2023

• build(dep): bump saalfx

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  fd4e80e

• feat: split on any non-digit character

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  4f8f296

• build: restructure, depend on libblosc1 for deb package

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  171ff9d

• build: bump version to 1.0.0-SNAPSHOT, remove version mangling for packages

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  1ff4d24

• fix: synchronize on image so it isn't modified while updating

  Show description for 7cdba9d
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  7cdba9d

• ci: add self-host m1 runner

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  1b5f20d

• fix: rendering issue with screen refresh padding

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  8b8afaa

Commits on Oct 12, 2023

• perf: no need to constantly create new affine objects

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  2e2e9cb

• perf: reuse LabelMultisetEntry reference

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  b20331a

Commits on Oct 13, 2023

• fix: don't select Label.INVALID when string is invalid

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  16e03c9

• perf!: parallel mask downsampling

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  c58fa43

• refactor: entrySetWithRef as Entry<Label>

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  9053385

Commits on Oct 16, 2023

• feat: warn users of scale levels that may be too small.

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  87aa016