CustomProteaseWindowFixAndNewProteases

This version fixes a bug and caused ProteaseGuru to crash when unexpected characters were entered into fields in the custom protease gui window. Unexpected characters are now blocked.

Mzlib is updated in this version.

framework .netcore is now upgraded to .net 6.0

Two new standard proteases were added to the dictionary (pepsin and papain).

SmithLab is now assuming responsibility for ProteaseGuru. That is the reason for moving to version 0.1.0.

0.0.23

Release Notes:

• Sequence Coverage maps are now exported as pdfs as well as pngs.
• Line spacing of sequence coverage maps now auto scales.
• Issue with same protein accessions across multiple databases resolved.
• Bug fix in custom enzyme generation.

0.0.22

Release Notes:

• Bug Fix: In Histogram MetaData output, bins with no content were not written to file. This has been adjusted.
• Bug Fix: If protein accessions contain invalid characters, export of protein specific results would result in a crash. Now user is notified of invalid characters and a compatible, generic protein name is utilized.

0.0.21

• Users can now select whether or not to include fixed carbamidomethylation of C and variable oxidation of M in their in silico digestion

0.0.20

• The ability to add modifications based on proteolytic cleavage events has been added.
• Amino Acid Row labels have been added to the sequence coverage map to increase legibility.
• Metadata for the sequence coverage maps are now exported enabling recreation of this plot.
• Protein specific output files have been updated to include files containing all and unique peptides for that protein.

0.0.19

Sequence Coverage Figure Legend Updates

0.0.18

Updated Sequence Coverage Visualization

• peptides that span more than one row extend beyond the margin
• all peptides are solid lines, shared peptides are more transparent (lighter colored)

0.0.17

Change in Protein Sequence Coverage Map Graphics

0.0.16

Merge pull request #12 from rmmiller22/master

Peptides Can Span More Than 2 lines in coverage maps

0.0.15

Proteins that results in no peptide sequences (based on user length criteria) are now carried forward to data visualization stage