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30 Open 8 Closed
30 Open 8 Closed
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Issues list

update Dockerfile
#42 opened Aug 22, 2022 by tgambin
2
create_analysable_targets not working
#41 opened Aug 3, 2022 by brianlucla
3
Installation errors with xhmm
#40 opened Jan 10, 2022 by longfei-stat
2
How many bam do I need ?
#39 opened Apr 19, 2021 by dridk
java error in the database download
#37 opened Feb 17, 2021 by flapa86
Failure in CNVDiagram produces empty js file
#36 opened Oct 15, 2020 by ssadedin
Chromosome * is not analysable by CODEX and many more
#35 opened Jul 30, 2020 by vinzenzmay
KILLED error when running ximmer through docker
#34 opened Feb 4, 2020 by emyli14
install script is missing
#33 opened Nov 26, 2019 by johnemajor
config. java.lang.IllegalArgumentException: Please set the HGFA parameter to your human genome reference in the config file at: /usr/local/ximmer/eval/pipeline/config.groovy Error
#29 opened Sep 9, 2019 by hkrzystek
5
startup failed 107: expecting '*', found '<EOF>' @ line 107, column 1.
#26 opened Aug 17, 2019 by biobai
Expose XIMMER_REF in config.groovy rather than a env variable for docker run
#25 opened Jul 11, 2019 by sclan
ERROR: Sample CREATE_INDEX=true appears in more than one BAM file
#24 opened May 9, 2019 by kunstner
ERROR: analysis pipeline did not produce expected analysed target region BED (running through docker)
#23 opened Apr 18, 2019 by xexpanderx
3
Empty diagram for CNV without gene annotation
#22 opened Mar 5, 2019 by pixuenan
Wrong coverage block highlight on the cnv diagram
#21 opened Mar 5, 2019 by pixuenan
docker install problem
#20 opened Jan 8, 2019 by jchenpku
High false positive number and x-replacement simulation failure
#18 opened Dec 24, 2018 by pixuenan
4
Analysis failed - getting JAVA errors:groovy.lang.MissingMethodException: No signature of method: groovy.util.ConfigObject.MOPs()
#17 opened Nov 7, 2018 by SafinaAr
16
Error at install
#16 opened Nov 6, 2018 by gybeata
5
Analysis failed
#13 opened Sep 6, 2018 by natashapinto
2
Canot get ximmer to run on Ubuntu 16.04
#11 opened Aug 23, 2018 by chapplec
7
parameter to take in count relatedness in data
#10 opened Jun 13, 2018 by gybeata
1
Error
#9 opened Feb 13, 2018 by SamKap-2
2
plans to host on dockerhub?
#7 opened Feb 8, 2018 by 0xaf1f
5
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