Install pyrokinetics correctly. #2
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| # Run these tests automatically on Github on every push and pull request. | |
| name: Check Pyrokinetics | |
| on: [push, pull_request] | |
| # We always run in a bash shell | |
| defaults: | |
| run: | |
| shell: bash | |
| # First build stella, and then perform pyrokinetics tests | |
| jobs: | |
| #----------------------------------------------------------------------- | |
| # Quick build | |
| #----------------------------------------------------------------------- | |
| # Build stella to perform pyrokinetics tests | |
| pyrokinetics-tests: | |
| name: Check Pyrokinetics | |
| runs-on: ubuntu-22.04 | |
| env: | |
| OMPI_MCA_rmaps_base_oversubscribe: yes | |
| MPIRUN: mpiexec -np | |
| STELLA_SYSTEM: gnu_ubuntu | |
| steps: | |
| # Check-out repository under $GITHUB_WORKSPACE | |
| - name: Check out repository | |
| uses: actions/checkout@v4 | |
| # Install dependencies | |
| - name: Install dependencies | |
| run: | | |
| sudo apt update | |
| sudo apt install -y gfortran make libfftw3-dev libnetcdf-dev libnetcdff-dev | |
| sudo apt install -y netcdf-bin python3 python3-pip openmpi-bin libopenmpi-dev | |
| # Build stella executable | |
| - name: Build stella | |
| run: | | |
| git submodule update --init --recursive | |
| make -j 12 | |
| chmod +x stella | |
| # Install dependencies | |
| - name: Install dependencies and python virtual environment | |
| run: | | |
| sudo apt update | |
| sudo apt install -y gfortran make libfftw3-dev libnetcdf-dev libnetcdff-dev | |
| sudo apt install -y netcdf-bin python3 python3-pip openmpi-bin libopenmpi-dev | |
| pip3 install --user -r AUTOMATIC_TESTS/requirements.txt | |
| pip3 install EXTERNALS/pyrokinetics/. | |
| sed -i 's/nproc = 16/nproc = 1/g' AUTOMATIC_TESTS/config.ini | |
| # Perform pyrokinetics tests | |
| - name: Pyrokinetics tests | |
| run: make pyrokinetics-tests | |