PEtab - an SBML and TSV based data format for parameter estimation problems in systems biology
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Updated
Aug 8, 2024
PEtab - an SBML and TSV based data format for parameter estimation problems in systems biology
Python package for working with PEtab files
Tool for validating that biosimulation software tools implement the BioSimulators standards for simulators
Template for a repository for building a BioSimulators-compliant command-line interface and Dockerfile for a biosimulation program
COBRApy biochemical network simulation program via BioSimulators-compliant command-line interface and Docker container
COPASI biochemical network simulation program via BioSimulators-compliant command-line interface and Docker container
tellurium biochemical network simulation program via BioSimulators-compliant command-line interface and Docker container
BioNetGen biochemical network simulation program via BioSimulators-compliant command-line interface and Docker container
GillesPy2 biochemical network simulation program via BioSimulators-compliant command-line interface and Docker container
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