Analyses of Penter, Borji & Nagler et al., 2023
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Updated
Nov 1, 2023 - R
Analyses of Penter, Borji & Nagler et al., 2023
A web-documentary about uranium mining in Mongolia and it's consequences for the nomads, living there.
A safe place for the personal scripts used in the long-read benchmarking project.
SIMulator for Long read transcriptome Analysis with RNA DecaY model
Performs archiving and transfer of Nanopore sequencing data
MuSTA: Multi-Sample Transcriptome Assembly for long-read isoform sequencing
tool for long read transcriptome assembly
Long read structural variants in rare disease cohort
preqclr is a software tool that reports on quality for long read sequencing data without the use of a reference genome.
Analyse RNA feature distributions.
Merge transcriptome read-to-genome alignments into non-redundant transcript models
Minor Variant Calling and Phasing Tools
Demultiplexing and debarcoding tool designed for LR-Split-seq data.
Fast and space-efficient taxonomic classification of long reads
Tool to annotate outfiles from ExpansionHunter and TRGT with the pathologic implications of the repeat
Suite of tools for use in genome assembly and consensus. Work in progress.
Sensitive and Fast Alignment Search Tool for Long Read sequencing Data.
BELLA: a Computationally-Efficient and Highly-Accurate Long-Read to Long-Read Aligner and Overlapper
A Python library to visualize and analyze long-read transcriptomes
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