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This pull request includes several improvements and updates to the
trias
package, focusing on enhancing functionality and automating processes.Functionality Improvements:
apply_gam()
function to avoid emerging status changes for negligible near-zero values by adjusting the thresholds in thedplyr::case_when
conditions. (R/apply_gam.R
). See Correct non relevant change of emerging status due to negligible non zero values of 1st and 2nd derivative #150.apply_gam()
function to show all emerging status values in the legend of the returned plots. (R/apply_gam.R
). See Add all possible emerging values in legend GAM plots #152.Automation and Workflow:
CITATION.cff
file when a new release is published, or when theDESCRIPTION
orinst/CITATION
files are modified. This workflow can also be triggered manually. (.github/workflows/update-citation-cff.yaml
) See Automatically updateCITATION.cff
via GitHub Actions #151.Documentation and Metadata:
DESCRIPTION
file. (DESCRIPTION
)NEWS.md
file to document the changes in version 3.0.2, including the improvements toapply_gam()
and the new GitHub Actions workflow for updatingCITATION.cff
. (NEWS.md
)plot_ribbon_em
function documentation from theman/plot_ribbon_em.Rd
file, as it is a help function (not exported). So, now marked as@noRd
in the source code. (man/plot_ribbon_em.Rd
). Seeplot_ribbon_em()
has docs but no@export
#132.