Skip to content

Minor feature and bugfix release

Compare
Choose a tag to compare
@awohns awohns released this 30 Jun 21:55
· 461 commits to main since this release

Breaking changes

  • The algorithm now operates in unscaled time (in units of generations) under
    the hood, which means that tsdate.build_prior_grid now requires the parameter
    Ne.

Features

  • Users now have access to the marginal posterior distributions on node age by running
    tsdate.get_dates, though this is undocumented for now.

Bugfixes

  • A fix to the way likelihoods are added should eliminate numerical errors that are
    sometimes encountered when dating very large tree sequences.