blarchive compression log to ./

uclahs-cds · Sep 21, 2023 · b83b2f8 · b83b2f8
1 parent 37f11b6
commit b83b2f8
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diff --git a/external/pipeline-Nextflow-config b/external/pipeline-Nextflow-config
diff --git a/module/common.nf b/module/common.nf
@@ -88,7 +88,7 @@ process compress_file_blarchive {
     set -euo pipefail
     dereferenced_file=\$(readlink -f ${file_to_compress})
     blarchive compress_files --input \$dereferenced_file \
-        --log ${params.work_dir}
+        --log ./
     ln -s \${dereferenced_file}.bz2 ${file_to_compress}.bz2
     """
     }