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Issues: vitessce/vitessce-python

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#92 by ilan-gold was closed Sep 27, 2021
Closed
Failed to load model class "Anymodel"
#305 by CReihsmann was closed Nov 8, 2023
Closed 2
Support SpatialData
#286 opened Jan 31, 2023 by keller-mark
Open 3
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92 Open 86 Closed
92 Open 86 Closed
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Issues list

data_utils.optimize_adata should store adata.X array as np.array, not np.matrix bug Something isn't working
#394 opened Dec 3, 2024 by keller-mark
Support a Vizarr-like API feature New feature or request
#391 opened Nov 21, 2024 by keller-mark
Question: How to show the obsSets on hover in spatial viewer of ome-tiff Image
#389 opened Nov 15, 2024 by vdsukhov
OME-Zarr output should write consolidated metadata
#388 opened Nov 15, 2024 by carsten-jahn
Refactor wrappers.py tech debt
#382 opened Oct 15, 2024 by keller-mark
Changelog tech debt
#381 opened Oct 15, 2024 by keller-mark
Linting + Formatting tech debt
#380 opened Oct 15, 2024 by ilan-gold
Add python types tech debt
#379 opened Oct 15, 2024 by ilan-gold
layout.to_dict() throwing: TypeError: unsupported operand type(s) for +: 'NoneType' and 'str'
#366 opened Sep 17, 2024 by ivirshup
Command functions should be able to return an updated config feature New feature or request
#359 opened Aug 21, 2024 by keller-mark
1
Warn if AnnDataWrapper options are empty as it would result in empty list for vc['datasets']['files']
#356 opened Aug 7, 2024 by falexwolf
4
Ability to use comparative views + pageMode in a Jupyter notebook cell-atlas feature New feature or request
#351 opened Jul 10, 2024 by keller-mark
1
Support writing plugin_esm using local file with anywidget FileContents feature New feature or request
#348 opened May 17, 2024 by keller-mark
Notebooks errors (list) bug Something isn't working docs Improvements or additions to documentation
#344 opened May 6, 2024 by thomcsmits
45 tasks
Notebooks environment.yml PackageNotFoundError for starlette==0.14.0 bug Something isn't working
#343 opened May 6, 2024 by thomcsmits
Helper function to use adata.uns[obs_set_col + "_colors"] for initial obs set colors feature New feature or request
#340 opened Apr 29, 2024 by keller-mark
Setting colors for obsSets?
#339 opened Apr 26, 2024 by srivarra
2
Support automatic instantiation of Wrapper objects feature New feature or request
#331 opened Apr 2, 2024 by keller-mark
2
Add option for widget to communicate directly with Zarr store (no local HTTP server) feature New feature or request
#322 opened Feb 24, 2024 by keller-mark
1 of 5 tasks
2
Additional improvements to adata_to_multivec_zarr function feature New feature or request
#320 opened Feb 9, 2024 by keller-mark
Adding scale bar to spatial view image
#311 opened Jan 15, 2024 by J-Yash
Minimal example for obsSegmentations.json for visualizing polygons in Spatial View
#310 opened Jan 11, 2024 by J-Yash
2
Convert spatialdata-plot plotting tree to Vitessce config feature New feature or request
#298 opened Sep 21, 2023 by keller-mark
1
Demos for SquidPy example datasets data_utils demo
#297 opened Sep 19, 2023 by keller-mark
Snakemake pipeline for 10x Genomics Multiome outputs data_utils
#296 opened Sep 18, 2023 by keller-mark
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