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fix: add default to path_2_processed arg #137

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merged 6 commits into from
Aug 22, 2023
Merged

fix: add default to path_2_processed arg #137

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be9a66d
fix: add path_2_processed default to Args
balajtimate Aug 22, 2023
9b8f4c5
test: update ci ref on docker publish (#134)
balajtimate Aug 22, 2023
02125c4
Ci test (#135)
balajtimate Aug 22, 2023
9ee223f
test: update ci ref on docker publish (#136)
balajtimate Aug 22, 2023
88d4f62
refactor: update CI
balajtimate Aug 22, 2023
32e11f4
refactor: add default to path_2_processed
balajtimate Aug 22, 2023
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2 changes: 1 addition & 1 deletion htsinfer/models.py
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Original file line number Diff line number Diff line change
Expand Up @@ -440,7 +440,7 @@ class Args(BaseModel):
read_orientation_min_mapped_reads: int = 20
read_orientation_min_fraction: float = 0.75
path_1_processed: Path = Path()
path_2_processed: Optional[Path]
path_2_processed: Optional[Path] = None
t_file_processed: Path = Path()


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