Update Dockerfile (#16)

PennLINC · Feb 17, 2023 · 9e613f0 · 9e613f0
1 parent 1542b06
commit 9e613f0
Showing 1 changed file with 5 additions and 1 deletion.
diff --git a/Dockerfile b/Dockerfile
@@ -96,7 +96,11 @@ COPY --from=build_fsl /usr/bin/fsl5.0-pngappend /opt/fsl/bin/fsl5.0-pngappend
 COPY --from=build_fsl /usr/bin/fsl5.0-remove_ext /opt/fsl/bin/fsl5.0-remove_ext
 COPY --from=build_fsl /usr/lib/fsl/5.0/libnewimage.so /opt/fsl/lib/libnewimage.so
 COPY --from=build_fsl /usr/lib/fsl/5.0/libmiscmaths.so /opt/fsl/lib/libmiscmaths.so
-ENV FSLDIR="/opt/fsl/lib" \
+COPY --from=build_fsl /usr/share/fsl/5.0/bin/slicer /opt/fsl/bin/slicer
+COPY --from=build_fsl /usr/share/fsl/5.0/bin/slicesdir /opt/fsl/bin/slicesdir
+COPY --from=build_fsl /usr/share/fsl/5.0/bin/pngappend /opt/fsl/bin/pngappend
+COPY --from=build_fsl /usr/share/fsl/5.0/bin/remove_ext /opt/fsl/bin/remove_ext
+ENV FSLDIR="/opt/fsl" \
     FSLOUTPUTTYPE="NIFTI_GZ" \
     FSLMULTIFILEQUIT="TRUE" \
     FSLLOCKDIR="" \