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16 Open 43 Closed
16 Open 43 Closed
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Issues list

add other viruses new material
#64 opened May 3, 2024 by tavareshugo
analysis of co-occurring mutations new material wastewater
#63 opened Mar 28, 2024 by tavareshugo
Make materials consistent throughout
#62 opened Feb 1, 2024 by tavareshugo
switch primer/genome syntax to the more generic --fasta and --bed?
#57 opened Jan 19, 2024 by tavareshugo
add mamba activate X throughout
#56 opened Jan 19, 2024 by tavareshugo
3 of 7 tasks
Panama workshop - Feb 2024
@tavareshugo
Prepare data for wastewater materials wastewater
#43 opened Dec 21, 2023 by tavareshugo
5 of 6 tasks
@bsalehe
6
figtree alternatives enhancement New feature or request
#36 opened May 17, 2023 by tavareshugo
1
Add metagenomic example enhancement New feature or request
#30 opened Feb 27, 2023 by tavareshugo
add section on CIVET reports enhancement New feature or request
#25 opened Sep 1, 2022 by tavareshugo
1
Variants long table CSV - clarifications enhancement New feature or request invalid This doesn't seem right
#23 opened Jul 8, 2022 by tavareshugo
5
Add note about mixed bases enhancement New feature or request
#21 opened Jul 8, 2022 by tavareshugo
Which variants are used in consensus assembly? enhancement New feature or request
#19 opened Jun 15, 2022 by tavareshugo
2
details about recombinant lineage classification enhancement New feature or request
#18 opened Jun 10, 2022 by tavareshugo
pipeline cheatsheet enhancement New feature or request priority
#16 opened May 31, 2022 by tavareshugo
1
expanded materials - ideas new material
#15 opened Apr 5, 2022 by tavareshugo
1 of 3 tasks
update license documentation Improvements or additions to documentation
#13 opened Mar 22, 2022 by tavareshugo
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