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    27 repositories

    • module_box_aokad

      Public
      repository for sharing dsub(ecsub)-based module
      Shell
      •1•0•0•0•Updated Jan 28, 2025Jan 28, 2025

    • EBFilter

      Public
      empirical bayesian mutation filtering
      Python
      •
      GNU General Public License v3.0
      •5•0•0•0•Updated Jan 8, 2025Jan 8, 2025

    • GCATContainer

      Public
      Dockerfile
      •0•0•0•0•Updated Oct 17, 2024Oct 17, 2024

    • juncmut

      Public
      Python
      •0•2•0•0•Updated Jun 3, 2024Jun 3, 2024

    • GCATWorkflow

      Public
      Python
      •
      GNU General Public License v3.0
      •1•7•1•0•Updated May 17, 2024May 17, 2024

    • simulation_sv_set

      Public
      Python
      •
      MIT License
      •0•0•0•0•Updated May 14, 2024May 14, 2024

    • nanomonsv_benchmark

      Public
      Python
      •0•0•0•0•Updated May 7, 2024May 7, 2024

    • nanomonsv-evaluation

      Public
      Python
      •0•0•0•0•Updated Apr 8, 2024Apr 8, 2024

    • GCATRunner

      Public
      Python
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Dec 14, 2023Dec 14, 2023

    • ncc-ccat-gap-pages

      Public
      HTML
      •0•0•1•0•Updated Sep 19, 2023Sep 19, 2023

    • nanopore_workflow_scripts

      Public
      Shell
      •0•3•0•0•Updated Aug 2, 2023Aug 2, 2023

    • ASWorkflow

      Public
      Adaptive_sampling_Workflow
      Shell
      •
      Other
      •1•1•0•0•Updated Apr 27, 2023Apr 27, 2023

    • ModbamETLTools

      Public
      Modbam ETL tools
      Python
      •
      GNU General Public License v3.0
      •1•0•0•0•Updated Dec 1, 2022Dec 1, 2022

    • gcat_post_analysis_docs

      Public
      GNU General Public License v3.0
      •0•0•0•0•Updated Mar 15, 2022Mar 15, 2022

    • GCATWorkflowCloud

      Public
      Python
      •
      GNU General Public License v3.0
      •1•4•1•0•Updated Feb 1, 2022Feb 1, 2022

    • GCATIdManager

      Public
      Management tools for sample name and analysis ID (UUIDs).
      Python
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Dec 24, 2021Dec 24, 2021

    • nanomonsnv

      Public
      A tools to detect somatic SNVs from paired nanopore sequencing data
      Python
      •0•0•0•0•Updated Aug 18, 2021Aug 18, 2021

    • module_box_kechiba

      Public
      Shell
      •0•0•0•0•Updated Jul 13, 2021Jul 13, 2021

    • module_box_friend1ws

      Public
      Dockerfile
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated May 29, 2021May 29, 2021

    • sv_filters

      Public
      additional filters on the structural variation
      Python
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Sep 26, 2019Sep 26, 2019

    • nanomon-sv

      Public archive
      Python
      •0•0•0•0•Updated May 30, 2019May 30, 2019

    • module_box

      Public
      repository for sharing dsub(ecsub)-based module
      GNU General Public License v3.0
      •0•0•0•0•Updated Feb 15, 2019Feb 15, 2019

    • vcf-standardizing-tools

      Public
      Python
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Nov 13, 2018Nov 13, 2018

    • challenge-seeds

      Public archive
      Shell
      •1•0•0•0•Updated Aug 31, 2018Aug 31, 2018

    • incubator-specification

      Public
      Ideas on VCF specification
      1•0•2•1•Updated Aug 15, 2018Aug 15, 2018

    • aws_cloud_template

      Public
      0•0•0•0•Updated Jul 31, 2018Jul 31, 2018

    • aws_protocol

      Public
      Protocol for using Amazon Web Service
      GNU General Public License v3.0
      •0•0•0•0•Updated Jul 27, 2018Jul 27, 2018