Minor fixes

scripts/register_missing_combiner_analysis.py

@@ -9,8 +9,7 @@
 
 from hail.vds import read_vds
 
-from cpg_utils import to_path
-from cpg_utils.hail_batch import init_batch
+from cpg_utils.hail_batch import config_retrieve, init_batch
 from metamist.apis import AnalysisApi
 from metamist.models import Analysis, AnalysisStatus
 
@@ -24,10 +23,10 @@ def get_sg_ids(vds: str) -> list[str]:
     Returns:
         list[str]: A list of sequencing group IDs.
     """
-    return read_vds(to_path(vds)).variant_data.s.collect()
+    return read_vds(vds).variant_data.s.collect()
 
 
-def main(vds: str, dataset: str):
+def main(vds: str):
     """Create and register a missing combiner analysis
 
     Args:
@@ -41,14 +40,16 @@ def main(vds: str, dataset: str):
         output=vds,
         status=AnalysisStatus('completed'),
         sequencing_group_ids=get_sg_ids(vds),
-        meta=None,
+        meta={},
     )
+    dataset: str = config_retrieve(['workflow', 'dataset'])
+    if config_retrieve(['workflow', 'access_level']) == 'test':
+        dataset += '-test'
     aapi.create_analysis(project=dataset, analysis=am)
 
 
 if __name__ == '__main__':
     parser = ArgumentParser()
     parser.add_argument('--vds', help='VDS to register analysis for.')
-    parser.add_argument('--dataset', help='Dataset to register analysis in.')
     args = parser.parse_args()
-    main(args.vds, args.dataset)
+    main(args.vds)