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Pull requests: smith-chem-wisc/MetaMorpheus

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Pull requests list

RNA in the GUI GUI New Feature ready for review Refactor Visualization
#2579 opened Oct 15, 2025 by nbollis Loading…
24
XicGrouping part2 ready for review
#2573 opened Oct 10, 2025 by zhuoxinshi Loading…
25
New variant stuff
#2572 opened Oct 10, 2025 by trishorts Loading…
3
Add classes for user-defined selected precursor lists to support MRM data workflows
#2554 opened Aug 12, 2025 by Alexander-Sol Loading…
11
ModSearchEngine and GlycanBox merging
#2541 opened Jul 24, 2025 by RayMSMS Loading…
Spectral library reading for MS2PIP outputs
#2536 opened Jul 17, 2025 by zhuoxinshi Loading…
3
Mod_Pair part1 ModBox and Reader New Feature WIP Work in progress, not ready for review
#2516 opened Jun 6, 2025 by RayMSMS Loading…
1
Ptm stoich Need MzLib Release Output Enhancement WIP Work in progress, not ready for review
#2475 opened Feb 17, 2025 by pcruzparri Loading…
Resource drainer
#2458 opened Jan 28, 2025 by Alexander-Sol Loading…
Require More Evidence to Write mod to Pruned Database Output Enhancement WIP Work in progress, not ready for review
#2444 opened Nov 27, 2024 by nbollis • Draft
1
Fragger and xcorr modules New Feature
#2439 opened Nov 14, 2024 by trishorts Loading…
1
DIA_XIC
#2380 opened Jun 25, 2024 by YulingDai Loading…
Only quantify peptides that clear the q-value threshold
#2375 opened Jun 18, 2024 by Alexander-Sol Loading…
5
Added custom protease window in GUI
#2352 opened Feb 22, 2024 by zhuoxinshi Loading…
10
add to dictionary glymassdic New Feature WIP Work in progress, not ready for review
#2346 opened Feb 16, 2024 by RayMSMS Loading…
1
Andromeda score New Feature WIP Work in progress, not ready for review
#2329 opened Dec 28, 2023 by trishorts Loading…
[WIP ]Add tailor score -NOT AN ACTUAL PR
#2298 opened Aug 2, 2023 by trishorts Loading…
Added option to quantify ambiguous peptides New Feature WIP Work in progress, not ready for review
#2277 opened Apr 29, 2023 by Alexander-Sol Loading…
1
Spectral recovery update
#2273 opened Apr 26, 2023 by Alexander-Sol Loading…
1
Max quant reader
#2262 opened Mar 10, 2023 by Alexander-Sol Loading…
[WIP] filter psms for flashlfq only by qvalue and qvalue notch Bug WIP Work in progress, not ready for review
#2259 opened Feb 27, 2023 by trishorts Loading…
1
[WIP] Unit Tests for LFQ in MetaMorpheus Bug dependencies Pull requests that update a dependency file Long-Term Stability Maintenance Validation WIP Work in progress, not ready for review
#2258 opened Feb 27, 2023 by trishorts Loading…
Changed Target Architecture to x64 Maintenance
#2254 opened Feb 20, 2023 by Alexander-Sol Loading…
4
Visualization options WIP Work in progress, not ready for review
#2195 opened Oct 26, 2022 by weaversd Loading…
2
option to use PEP as peptide filter for protein inference New Feature WIP Work in progress, not ready for review
#2187 opened Sep 21, 2022 by trishorts Loading…
4
ProTip! Updated in the last three days: updated:>2025-10-31.