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phylogenetic-diversity

Here are 11 public repositories matching this topic...

shawnlaffan / biodiverse

A tool for the spatial analysis of diversity

phylogenetic-trees spatial-analysis phylogeography phylogenetic-diversity phylodiversity endemism beta-diversity species-turnover randomisations hacktoberfest biodiverse

Updated Nov 25, 2024
Perl

Diversity.jl

EcoJulia / Diversity.jl

Julia package for diversity measurement

julia phylogenetic-diversity ecology biodiversity partitioning-diversity diversity-measurement

Updated Nov 18, 2024
Julia

vmikk / PhyloNext

A pipeline for phylogenetic diversity analysis of GBIF-mediated data

docker r nextflow singularity phylogenetic-diversity phylodiversity endemism beta-diversity randomisations gbif biodiverse

Updated Jun 17, 2024
R

pierrebarbera / scrapp

Species Counting on Reference trees viA Phylogenetic Placements

phylogenetic-trees phylogenetics phylogenetic-diversity

Updated Oct 9, 2020
Python

CmlMagneville / distill_website

My Website (made with distill package)

phylogenetic-diversity phd marine-biology functional-diversity underwater-cameras diversity-drivers mediterranean-forests

Updated Jun 18, 2024
CSS

naturalis / barcode-constrained-phylogeny

Pipeline for building topologically-constrained phylogenies from DNA barcode data

phylogenetics phylogenetic-diversity metabarcoding phylogenetic-placement dna-barcoding

Updated Nov 19, 2024
Python

b-cubed-eu / pdindicatoR

Repository for the phylogenetic diversity indicator workflow as part of the B3 project.

r conservation datacube phylogenetic-diversity indicator biodiversity

Updated Dec 2, 2024
R

vmikk / biodiverse-docker

Docker and Singularity images to run Biodiverse software

docker singularity phylogenetic-diversity endemism biodiversity

Updated Mar 22, 2024
Perl

PhyloNext / phylonext.github.io

PhyloNext documentation

diversity nextflow phylogenetic-diversity endemism gbif phylogeny

Updated Jun 17, 2024

afrogri37 / Community-assembly-ecoregional-level

Calculation of taxonomic, phylogenetic and functional diversity indexes of regional communities of Trichoptera (caddisflies) in 18 ecoregions across Europe. Analyses of niche phylogenenetic conservatism.

phylogenetic-diversity functional-diversity niche-conservatism

Updated Sep 13, 2021
R

Cibiv / PDA

Phylogenetic Diversity Analyzer

conservation phylogenetic-diversity biodiversity

Updated May 18, 2017
C++

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