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proc_mica
rcruces edited this page Aug 31, 2023
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Micapipe is a processing pipeline providing a robust framework to analyze multimodal MRI data. This pipeline integrates processing streams for T1-weighted, microstructure-sensitive, diffusion-weighted, and resting-state functional imaging to facilitate the development of multiscale models of neural organization. For this purpose, we leverage several specialized software packages to bring BIDS-formatted raw MRI data to fully-processed surface-based feature matrices.
Further information about the organization, outputs, and how to run the pipeline can be found in the links below:
| Description | Website |
|---|---|
GitHub |
https://github.com/MICA-MNI/micapipe |
ReadTheDocs |
https://micapipe.readthedocs.io |
Docker |
https://hub.docker.com/r/micalab/micapipe/ |
BIDS-App |
https://bids-apps.neuroimaging.io/apps/ |