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Eric Deutsch edited this page Oct 21, 2024 · 21 revisions

Bioinformatics Hub at the HUPO 2024 World Congress

Overview

The Bioinformatics Hub is a place where bioinformaticians gather together with three aims: (i) to provide their advice, knowledge, and support to anyone with a relevant question; (ii) to discuss current issues and challenges in proteomics informatics with the entire community; and (iii) to work on interesting, synergistic projects and to freely exchange tools, algorithms and know-how with each other, across all labs, seniorities and levels of experience.

Hashtags for Twitter

#BioinformaticsHub #HUPO2024

Main Congress

Bioinformatics Hub Schedule:

Listed times are Dresden local time

Monday October 21:

  • 10h15-11h45: Session #M1 - Machine Learning and AI in Proteomics: overview, resources, and opportunities (Wout Bittremieux, Mathias Wilhelm)

  • 11h45-13h15: Session #M2 - Machine Learning and AI in Proteomics: current models and new opportunities (Mathias Wilhelm, Tiannan Guo, Wout Bittremieux)

  • 14h00-15h15: Session #M3 - Making proteomics data AI ready: Gathering the community for the 2025 PSI spring workshop (Tine Claeys, Samuel Wein, Andy Jones)

  • 15h15-16h30: Session #M4 - Ongoing and future standards from the Proteomics Standards Initiative (Sandra Orchard, Juan Antonio Vizcaino, Eric Deutsch)

  • 16h30-17h35: Session #M5 - HPP and Function scoring (Eric Deutsch, Sandra Orchard, Marie Locart-Paulet)

Tuesday October 22:

  • 10h15-11h45: Session #T1 - Context-specific molecular complexes (Henning Hermjakob, Sandra Orchard)

  • 11h45-13h00: Session #T2 - Functional Enrichment analysis in proteomics (Mathieu Lavallée-Adam, Marie Brunet, Daniel Figeys)

  • 15h15-16h30: Session #T3 - Non-canonical open reading frames (John Mudge, Sebastiaan van Heesch, Eric Deutsch)

Wednesday October 23:

  • 09h00-10h15: Session #W1 - ProteomeXchange, PTMexchange, DIAexchange, and MetabolomeXchange (Juan Antonio Vizcaíno, Kerry Ramsbottom, Emily Bowler-Barnett)
  • 10h15-11h45: Session #W2 - mzNext: next generation mass spec data format (Samuel Wein, Oliver Kohlbacher)
  • 11h45-13h00: Session #W3 - Meet the Bioinformatics teams

Organizers:

  • Eric Deutsch
  • Tim van den Bossche
  • Juan Antonio Vizcaíno
  • Sandra Orchard
  • Magnus Palmblad
  • Lydie Lane
  • Sue Weintraub
  • Nuno Bandeira
  • Mathieu Lavallée-Adam
  • Cheng Chang
  • Alexey Nesvizhskii
  • Wout Bittremieux
  • Oliver Kohlbacher
  • Veit Schwämmle
  • Marc Vaudel
  • Mathias Wilhelm
  • Ralf Gabriels
  • Henning Hermjakob
  • Marie Locard-Paulet
  • David Bouyssié
  • Tine Claeys
  • Peter Horvatovich
  • All others are welcome!

Visit us at http://compms.org/

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